Halorhabdus sp. BNX81: HBNXHr_1438
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Entry
HBNXHr_1438 CDS
T09448
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habn03000
]
HBNXHr_1438
Transcription factors [BR:
habn03000
]
Prokaryotic type
Helix-turn-helix
Other families
HBNXHr_1438
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
MarR_2
PLDc_2
HTH_36
HTH_11
Rrf2
DUF7343
MarR
HTH_IclR
HTH_Cmi2_C
HVO_A0261_N
HTH_24
HTH_29
FaeA
Motif
Other DBs
NCBI-ProteinID:
WEL21500
LinkDB
All DBs
Position
complement(1427769..1428839)
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AA seq
356 aa
AA seq
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MSENDDSALARQLEHFGLSDTEIQTYLAVLEHGEAKASTIADATGVSKRYVYSVCEELED
QGFVEVNDHVVPTKIRAKRPEDVIEILSNRLDEIEPALERRFSEAETRPQRFDVIKSRVT
VVKRIGEYIDDAEQRVALSIPYSTLPQVVEELQAAVDRGVFVLLLVTDVDSDPADFTEYD
RPIASVVRSWNVPIPVMLAVDHELGIISSSEMMTVANSDERAISLVQDRIVPTLFGSFLA
NFWSSADQQYVIDAASLPGTYESIEQAVFQATLHLRNDTAITARVEATPAASETDTETVT
GRVVATRQGVVDPITNEFPIEHTLVLETDEGRTTVGGHGAFLEEYAARTVTLEAAE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacgacgattcggcgcttgcccggcagttagaacacttcgggctctcggat
accgaaatccagacgtatctggctgtcctcgaacacggagaggcaaaggcgagtacgatc
gccgacgcgaccggcgtttccaagcgatacgtctacagcgtgtgtgaggaactcgaagat
cagggattcgtcgaggtcaacgaccacgtcgtcccgacgaagatccgtgccaagcgaccg
gaagacgtcatcgagatcctctcgaatcgcctcgacgaaatcgaaccggcactcgaacgc
cgcttttcggaagccgagacacgcccacagcgcttcgacgtcatcaagtcccgggtcaca
gtggtcaaacgcatcggcgagtacatcgacgacgccgagcaacgtgttgcactctcgatc
ccgtattcgacgctcccccaagtcgtcgaggagttacaggctgccgtcgaccgcggcgtg
ttcgtcctcctgttggtaactgacgtcgactcggacccagctgacttcaccgagtacgat
cgcccgatcgcgagtgtcgttcggagctggaacgtcccgattccggtcatgttggccgtc
gatcacgaactcggcatcatctcgtcttcggagatgatgacggtcgcaaacagcgacgag
cgcgcgatctcgctggtacaggaccggatcgtcccgacgctgttcggatcgttcctggcg
aacttctggtcgagcgccgaccaacagtacgtgatcgatgctgcgtcgctgccggggacc
tacgagagcatcgaacaggccgttttccaggcgacgctgcacctgcgaaatgacactgcg
attactgcccgggtcgaagcgacgccggccgcttccgagacggacaccgaaacggtcacc
ggccgggtcgtcgcgacccgtcagggggtcgtcgacccgattacgaacgagttcccgatc
gaacacacgctcgtgctggagaccgatgagggacggacgacggtcggcggccacggagcc
ttcttggaggaatacgccgccaggacggtcacactcgaggccgctgagtga
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