Halorhabdus sp. BNX81: HBNXHr_1459
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Entry
HBNXHr_1459 CDS
T09448
Name
(GenBank) ABC-type spermidine/putrescine transport system,ATPase component
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBNXHr_1459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habn02000
]
HBNXHr_1459
Transporters [BR:
habn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HBNXHr_1459
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
CysA_C_terminal
Rad17
AAA_22
AAA
AAA_28
AAA_16
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WEL21521
LinkDB
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Position
complement(1447890..1448924)
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AA seq
344 aa
AA seq
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MAERVRIDDITKRFDETLAVDDVSLTVEPGETLGLVGPSGCGKTTTLRTVAGFETPDAGR
VLFDDEAVTHVPPEQRDVGLVFQSYALFDNMTVRENVEFGLQMRDVSPEQRAKRASELLD
LLDIGGLGDRDPTTLSGGQQQRVGLARALAIEPRVLLLDEPMTGLDAKLKSRLQEEIGTL
LEDIDVTSLYVTHDQAEAMVMCDRLAVMNDGRIEQVGTPAEIYESPANGFVADFVGTSNR
LDATVQNGTLDLGHAAIEAPPGAPEGDVTVVARPEAFALDGGPVEATVEDRFYLGEHVRV
SARTPDDQQLTLRFDPENAPDNGDVTLSLDSDRVHLLPTDAANA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacgtgttagaatcgacgacatcacgaaacgcttcgacgaaacgctcgccgtc
gacgacgtctcgttgacggtcgaaccgggtgagacgctgggactcgtcggtccctcaggt
tgtggcaagaccacgaccctccgaaccgtcgcgggcttcgaaactcccgatgcgggacgg
gtactgtttgacgacgaggcggtgacccacgtcccgcccgaacagcgcgatgtcggactg
gtttttcagtcctacgcgctgttcgataacatgaccgttcgggaaaacgtcgagttcggc
ctgcagatgcgggacgtgtccccggaacaacgggcaaagcgggcgagcgagttgctcgac
ctgctcgatatcggcgggctgggcgaccgcgacccgacgacactctcgggcggccaacag
cagcgagttggactcgcccgggcactggccatcgagccacgcgtcctgttgctcgacgag
ccgatgaccggcctggatgcgaaactcaaatctcggctgcaagaggaaatcggcacgctg
ctggaggatatcgacgttacgtcgctgtacgtcacccacgaccaggccgaggcgatggtg
atgtgtgatcgtctcgcggtgatgaacgacggccgcatcgaacaggtgggcaccccggcg
gagatatatgagtcaccggccaatggcttcgtggccgatttcgtcggcacgtcgaaccgg
ctggacgcgacggtccaaaacgggacgctggatctgggtcacgcggccatcgaggcaccc
ccgggtgccccggagggcgacgtgacggtggtcgcccgtccggaggccttcgccctcgac
ggcggtcccgtcgaggcgaccgtcgaggatcgcttttatctgggtgaacacgtccgggtg
agcgcgcgaacgcctgacgaccagcagttgacactgcgctttgaccccgagaacgcgcct
gataacggcgacgtaacactctcgctcgattcggaccgtgtccacctgctcccgacggac
gccgccaacgcatga
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