Halorhabdus sp. BNX81: HBNXHr_1556
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Entry
HBNXHr_1556 CDS
T09448
Symbol
rfcL
Name
(GenBank) Replication factor C large subunit
KO
K04800
replication factor C large subunit
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBNXHr_1556 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habn03032
]
HBNXHr_1556 (rfcL)
DNA replication proteins [BR:
habn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
HBNXHr_1556 (rfcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_16
DNAX_ATPase_lid
AAA_30
AAA_assoc_2
AAA_lid_RFC1
nSTAND3
AAA_14
AAA_5
AAA_2
AAA_28
AAA_25
VapE-like_dom
RNA_helicase
IstB_IS21
DUF815
AAA_24
AAA_33
NACHT
ATPase_2
Bac_DnaA
Mg_chelatase
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
WEL21617
LinkDB
All DBs
Position
complement(1550414..1551895)
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AA seq
493 aa
AA seq
DB search
MTDWTEIHRPSTLAEVRGNDKARDALREWAESWPDHREAVVLYGSPGIGKTSAAHALAND
MDWPTIELNASDSRTKDVIEQVAGEAAKSGTLAQGGSGRRLVILDEADNLHGNVDRGGTR
AITALVKEAQQPIVLIANEFYEMSKGLRNACRDIEFRDVSTRSIVPVLRDICRQEDVGFE
KEALRKIAEMNDGDLRGAINDLQAIAEGRDTVTEDDVVTSERDRTTDIFSFLDTVLKEAD
AQETLEASYDVDETPDDLISWIEDNVPKDYEGAELARAYRSLANADRWLGRVRATQNYSF
WRYASDAMTAGVAAARSGEKGGWTRYGPPSYWSKLGRTRGARDTRDDVARAIATTSGVSM
STARREVLPYLETMTHHCKNRELTVSMTAAYDLDADHVAFITGSGADTNKIASIVEDAAE
RRETAAVDASEGAFDPGETGDSSSQGTDGEQRDGQPEPIDSQEAEERSAPDEAETSVEED
EADDQQTGLGDFV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgactggacggagattcatcgtccttcgacgctcgcggaggtgcggggcaacgac
aaggcccgcgacgccctccgggagtgggccgagtcctggcccgaccaccgcgaggcagtc
gtcctctatggctcgcctggcatcgggaaaacctcggcggcccacgccctcgccaacgac
atggactggccgacgatcgaactcaacgccagtgactcccggaccaaagacgtcatcgag
caggtcgcgggcgaggctgccaaaagcggcacgctcgcccagggtggatcagggcggcga
ctcgtcatcttggacgaggccgacaacctccacggcaacgtcgaccgcggcgggacgcgg
gcgatcacggccctggtcaaggaggcccaacagccgatcgtcctcatcgccaacgagttc
tacgagatgagcaagggcctccggaacgcctgccgggacatcgagtttcgggacgtctcc
acccggtcgatcgtccctgtcctccgtgatatctgccgacaggaggacgtcggcttcgag
aaggaggcactccgaaagatcgcggagatgaacgacggtgatcttcggggagcgatcaac
gatctgcaggccatcgccgagggccgggacacggtgaccgaagacgacgtcgtgaccagc
gaacgcgaccggacgactgacatcttttcgtttctcgataccgtcctgaaggaagcagac
gcccaggaaaccctcgaagcgtcctacgacgtcgacgagacgcccgacgacctcatctcc
tggatcgaggacaacgtgcccaaggactacgagggcgcggaactggcacgtgcctaccgc
tcgctcgcgaacgccgaccggtggctcggtcgcgtgcgggctacccagaactactccttc
tggcgatatgcgtccgacgccatgacagccggtgtcgcggccgcacgcagcggtgagaag
ggcggctggacgcgctatggcccgccgagctattggtcgaagctcggtcgaaccaggggc
gcacgggacacgcgcgacgatgtcgcccgcgccattgcgacgaccagcggcgtcagcatg
tccaccgcgcgccgcgaggtgttgccgtatctggagacgatgacccaccactgcaagaac
cgcgagttgacggtttcgatgacggcggcctacgatctcgacgccgaccacgtggcgttc
attacgggcagcggtgcggacacgaacaagatcgcttcgatcgtcgaggacgcggcagaa
cgccgggaaacggccgccgtcgacgcctcggaaggcgcgttcgacccgggtgaaaccggc
gattcgtcgtcccagggcactgacggtgagcaacgggacggccaaccggaaccgatcgac
tcacaagaagccgaggaacgcagtgctccggacgaggctgagacgagcgtcgaggaagat
gaggccgacgatcaacagaccggtctcggcgacttcgtctag
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