Halorhabdus sp. BNX81: HBNXHr_1618
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Entry
HBNXHr_1618 CDS
T09448
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
habn03009
]
HBNXHr_1618 (ycaO)
Ribosome biogenesis [BR:
habn03009
]
Prokaryotic type
ribosomal protein modification factors
HBNXHr_1618 (ycaO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Peptidase_A21
Motif
Other DBs
NCBI-ProteinID:
WEL21679
LinkDB
All DBs
Position
complement(1614440..1616137)
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AA seq
565 aa
AA seq
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MGAGPAVEAVESALGDVDSAVSTCEPDEIEDYDLGIVVDVAGAGTFERANERALETEASW
IAIELGGVGGVPVVDAAITGFGPETACYECLRKRVRANVDPAEEPTEAPPPTTARFAGAI
AGRVAASTLDRSVDAPEVFGFVTEIPEATRRLLPVPHCTCGTEPSRTIERTAVDRDLEAT
IARAEQGLDDRLGIVQEVGEIESFPAPYYLARNGDTDGFSDVSSTGPAAGVDVNWNAALM
KALGEAYERYSAGVYRRESFRTAAMEELARPIAPSSFVTPEPPGDGPYDWIEGQDLATGQ
GVQVPASVTVYPPSDDRFRPANTTGLGFGNAMVEALLSGLYEVIERDASMLSWYSTFEPL
ELDVSDDRFETLARRVNVEGLSVTPLLLTQDIDVPVVAVAVHRADGEWPRFALGSSANLD
PAAAARSALAEAVQNWFELRQMGPDGAVDASGAIGDYATFPDVVADFVDAAGTVPAADVA
PDAPDDGGEALSAVVERVTDAGLSPYAVRLTPRDIEAIGFEAVRVLVPSAQPLFLGDPYF
GERLETVPDRLGFEARPDRAFHPFP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgccggtccggccgtcgaggcggtcgaatccgcgctcggtgacgttgatagcgcc
gtgtcgacgtgtgaacccgatgaaatcgaggactacgacctggggatcgtcgtcgacgtt
gccggtgcaggcaccttcgaacgggcgaacgagcgcgcgctcgaaacagaagcatcctgg
atcgcgatcgaactcggcggtgtcggcggcgtcccggttgtcgacgccgcgatcaccgga
tttgggccggagacggcgtgttacgagtgtctccgcaagcgcgtccgggcgaacgtcgat
ccggcggaggagccgacggaagccccaccgccgacgacggcacggttcgccggggcaatc
gccggccgggtggctgcgagcacgcttgatcgctccgtcgacgccccggaggtcttcggg
ttcgtgacggaaattccggaggcgacgcgccgcttgctccctgtcccgcactgtacatgc
gggacggagccgtcacggaccatcgagcgaacggccgtcgaccgcgaccttgaggcgacg
atcgcgcgggccgagcaggggctcgatgaccgtctcgggatcgtccaggaggtcggcgag
atcgagtccttccctgccccctactacctcgcccggaacggcgacacggacgggttcagc
gacgtctcctcgactggcccggcagcgggcgtcgacgtcaactggaacgctgcactgatg
aaagcgctcggggaagcctacgagcgatacagtgccggcgtctatcggcgtgaaagcttc
cggacagccgccatggaggagctggcccgaccgatcgcgccgtcgtcgttcgtgacgccg
gagccgcccggagacggcccttatgactggatcgaggggcaggatctcgcaaccggccag
ggggtgcaggtgccggcgtcggtgaccgtctatccgccgtccgacgatcgcttccggccc
gcgaacacgaccgggctcggctttggcaacgcgatggtcgaggcgttgctgtcgggactg
tacgaagtgatcgagcgcgacgcgtcgatgctgtcgtggtattcgacgttcgaaccgctg
gaactcgacgtttcggacgatcgtttcgagacgctcgccaggcgggtaaacgtcgagggg
ctctcggtcacgccactcctgctcacccaggatattgacgtgccggtcgtggcggttgcc
gtccaccgggcggacggcgagtggccccggttcgccctcggatcgagcgcgaatctcgat
cccgccgccgctgcgcgctcggcgctggccgaagcggtccagaactggttcgaactccgc
cagatggggccggacggtgccgtcgacgccagcggcgcgatcggtgactacgcgacattc
cccgacgttgtcgcggacttcgtcgacgccgcgggaactgtcccggcagccgatgtcgca
cccgatgcgcccgacgatgggggtgaggcgctgtcggccgtcgtcgaacgggtcaccgac
gccggtctctcgccgtacgcggtgcgacttacgccccgcgacatcgaagcgatcggattc
gaggccgttcgcgtgcttgttccgtcggcccagccgctgtttctcggcgatccgtacttc
ggtgaacgactcgaaacagtcccggaccgtctcggattcgaggcacggccggaccgtgcg
ttccatccgttcccttga
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