Halorhabdus sp. BNX81: HBNXHr_1643
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Entry
HBNXHr_1643 CDS
T09448
Symbol
idsA3
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn00900
Terpenoid backbone biosynthesis
habn01100
Metabolic pathways
habn01110
Biosynthesis of secondary metabolites
Module
habn_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HBNXHr_1643 (idsA3)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
HBNXHr_1643 (idsA3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
habn01006
]
HBNXHr_1643 (idsA3)
Enzymes [BR:
habn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HBNXHr_1643 (idsA3)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HBNXHr_1643 (idsA3)
2.5.1.29 geranylgeranyl diphosphate synthase
HBNXHr_1643 (idsA3)
Prenyltransferases [BR:
habn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HBNXHr_1643 (idsA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HR1
Motif
Other DBs
NCBI-ProteinID:
WEL21704
LinkDB
All DBs
Position
complement(1643832..1644653)
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AA seq
273 aa
AA seq
DB search
MRSSDPLDPGVIGETVDDHLGSVLPSAPDALVDDARTLLGKMSDRIRGQWLVVGAQTGSA
DIDIEDILPAATSVELVYGQAVANAQAAGFDTGALDRDQALLTSDYLHSLAYTAMGSVKS
DPSVRQACFDSLSDASQRLASLWSRLEETRAEDSSAPDSVPIDPIVMATAGDIAGLLGGS
DPDSRSALREAGAALGIARWRPDGQSPADDQTDVVAETMPGKWSASDVVSVGDPDRLRGL
LDPLPQSSATETLRSFATSRCPNAVEHRPNIHE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgtccgatccactcgatccgggtgtgatcggcgagacagtcgacgatcatctc
ggatctgtcctgccgagcgcaccggacgccctcgtcgacgatgcacgtacattgcttgga
aagatgtcggaccggatccgtggccagtggctcgtcgtgggcgcacagactggttcggcg
gacatcgatattgaggacatcctcccggcagcaacgagtgtcgaactcgtctacggacag
gcagtagctaacgctcaagcggccggcttcgacactggggcgttggaccgtgaccaggcg
ctgttgaccagcgattatctccattcgctcgcgtacacggcgatgggatccgtcaaaagt
gacccgtcagtccggcaggcctgtttcgattcactctcggacgcgagtcaacggcttgct
tccttgtggagccgactggaagaaacacgggccgaggattcctcagcgccggactcggtc
ccgatcgatccgatcgtgatggcgacggcgggtgatatcgccggactgctgggaggtagc
gacccggattcgcgatcggcgctccgagaagccggcgcggcactcgggatcgctcgctgg
cgacctgacggacagtctcctgccgacgaccagacggatgtcgtcgccgagacgatgccc
ggcaagtggtcggctagtgatgtcgtctctgtcggcgatccggatcgtctccgggggctt
ttggatccactcccacagtcgtccgcgaccgagacgcttcggtcgtttgccacctcacgg
tgtccgaacgccgtcgaacatcgccccaacatccatgagtga
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