Halorhabdus sp. BNX81: HBNXHr_1674
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Entry
HBNXHr_1674 CDS
T09448
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habn03000
]
HBNXHr_1674
Transcription factors [BR:
habn03000
]
Prokaryotic type
Helix-turn-helix
Other families
HBNXHr_1674
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7436
TrmB
MarR_2
PadR
PLDc_2
HTH_IclR
AlkZ-like
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
WEL21735
LinkDB
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Position
1678960..1679769
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AA seq
269 aa
AA seq
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MVNLCDLGLSSYEDQAYRTMLGHGPVSAMDLAQASDVPEGRIYDVLDSLETRGLVRCQTH
SRPKQYLAVEPEAAIDRLVETRSRELREEINRYEVVGNRLIDELSADGSVSEQFLTTAIG
VEDATELLLERIAVADEQVVMVADIFTSEFDVAEMGPDILDHIADAIERGVDVSMLVPHR
LVDAVPGGFIDRIEREPFTDDGFAVRTTDQLYGAFFLLDHVELCFDVVNPMERDAMIGLI
NVKDPSFALELESQFRKHWEEATRYEPGL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggttaacctgtgtgaccttggattgtcgagctacgaggaccaggcataccggaccatg
ctgggtcacggcccggtctcggcgatggacctcgcccaggcgagcgatgtcccggagggg
cgaatctacgacgtcctcgatagcctggagacccgggggctggttcgctgccagactcac
agccgaccgaagcagtatctcgcggtcgaaccggaagcggcgatcgatcgactcgtcgaa
acccgttccagagaactgcgcgaggagatcaatcgctacgaagtcgtgggtaatcgactc
atcgacgagctctccgcggacggatccgtgtccgaacagtttctgacgacggcgatcggc
gtcgaggacgcaaccgagttgttactcgaacgcatcgccgtcgccgacgagcaggtggtg
atggtcgcggacatcttcacatcggagttcgacgtcgccgagatggggccggacatcctc
gatcacatcgccgacgccatcgaacgcggcgtcgacgtctcgatgctggttccccatcgg
ctggtcgacgccgtaccgggcggatttatcgaccgaatcgaacgcgaaccgttcaccgac
gacggcttcgccgtgcggacgaccgaccagctgtatggggcgttctttcttctcgaccac
gtcgagctgtgtttcgatgtcgtgaacccgatggaacgtgacgcgatgatcggactgatc
aacgtcaaagacccatcgttcgcactcgaactggagtcacagttccgaaaacactgggaa
gaagctactcggtacgaacccggactgtaa
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