Halorhabdus sp. BNX81: HBNXHr_1902
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Entry
HBNXHr_1902 CDS
T09448
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
habn03016
]
HBNXHr_1902 (truD)
Enzymes [BR:
habn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HBNXHr_1902 (truD)
Transfer RNA biogenesis [BR:
habn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HBNXHr_1902 (truD)
Prokaryotic type
HBNXHr_1902 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WEL21958
LinkDB
All DBs
Position
complement(1901693..1903051)
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AA seq
452 aa
AA seq
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MRQAHPVEQAVGMEYYVSDSDGVGGRLRREPAAFGVREVEAFQVEPIDAKQGAYPHVVFR
ATLAGWDTNDFAGVLSDHLGISRERVSWAGTKDKYAKTTQLFSVAKVDPADLETIDLSDV
EIEVLGRSGRPILFGDLAGNAFEIEISEPDAPGNLDGVLDELAAFAGSASGGGEDDGSTR
IGVPNYFGQQRFGSQRPVTHEVGLAIARGDWTDAVLAYVGNPHEREREDTREARKYVTET
EDWEGALDRLPKRLGYERSMCHRLVENGADDPEDFQEALEAVPTNLQQLFVNAAQSYAFN
RILSARLERGLPFDEPVAGDVVCFADSGAPDGLELPDTGRTQRVTEDNVGTVRRHCERGR
AFVTAPLLGTDSERPDGEPGEIERAVFEDLGISPADFDLPGEFDSEGTRRAILLRTDLSV
ERDPLTLSFALPKGSYATVVLREITKADPADL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaggcacaccccgtcgagcaagcagtcggcatggagtactacgtcagcgacagc
gacggcgtcgggggccgccttcgtcgggagcccgcggccttcggcgtccgtgaggtcgaa
gccttccaggtcgagcccattgacgccaagcagggcgcgtacccacacgttgtcttccgg
gcgacgctcgcgggctgggacaccaacgacttcgcgggcgtcctctcggatcacctcggg
atcagtcgcgaacgcgtctcctgggccgggacgaaggacaaatacgcgaagacgactcag
ctgttctccgtcgcgaaagtcgaccccgccgatctcgaaacgatcgacctctccgatgtg
gaaatcgaggtcctgggtcggagcggccggccgatcctctttggcgatctggcgggcaac
gccttcgagatcgagatcagcgaacccgacgcgcccggaaatctcgatggagttctcgac
gaactcgccgcgttcgccggcagcgcgtccggcggtggcgaggacgacggctcgacccgc
attggcgtccccaactacttcgggcagcaacgtttcggcagccagcgcccggtcacccac
gaggtcggcctcgccatcgcccgcggcgactggacggacgccgttctcgcgtacgtcggg
aatccacacgaacgcgagcgcgaggatacccgcgaggcacggaagtacgtcacagaaacc
gaggattgggaaggcgcgctcgatcgactccccaagcgcctgggctacgaacggtcgatg
tgccatcgactcgtcgagaacggggccgacgaccccgaagacttccaagaagcgctggag
gcggtcccgacgaacctccagcaactgttcgtcaacgctgcccagtcctacgcgttcaat
cggattctctcggcacggctggagcgcgggcttcccttcgacgagccagtcgcgggcgac
gtggtctgtttcgccgacagcggtgctcccgatggcctcgaactgccggacaccgggcgg
acgcagcgtgtaaccgaggacaacgtcgggacggttcgccgccactgcgagcgcgggcgg
gcgttcgtgaccgcgccgctgctcgggaccgacagtgagcgcccggatggtgagccgggc
gaaattgagcgggctgtcttcgaagatctggggatcagcccggcggacttcgaccttccg
ggcgagttcgactcggaaggcacgcgacgggcgatcctcctgcggacggacttatcggtc
gaacgggatccgctgacgctctcgtttgcgctcccgaaaggctcgtacgcgacggtcgtc
ctgcgggagatcacgaaagcagatccggcggacctctga
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