KEGG   Halorhabdus sp. BNX81: HBNXHr_1918
Entry
HBNXHr_1918       CDS       T09448                                 
Symbol
uvrC
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
habn  Halorhabdus sp. BNX81
Pathway
habn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:habn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HBNXHr_1918 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:habn03400]
    HBNXHr_1918 (uvrC)
DNA repair and recombination proteins [BR:habn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HBNXHr_1918 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG_UvrC UvrC_RNaseH UvrC_M HHH_5 HHH GIY-YIG UVR HHH_2 DUF7508 HHH_3
Other DBs
NCBI-ProteinID: WEL21974
LinkDB
Position
complement(1914960..1916699)
AA seq 579 aa
MDSAEVRSRAGDLPTEPGVYQFVDSSDEDATVLYVGKAVALRDRVRSYADPRGERIRRMV
ERAADIDVVVTDTETQALLLEANLIKRHQPRYNVRLRDDKSYPLVQLTDHPAPRIEITRD
PAEGADVFGPFTDKSDVETVVKAIRETFGLRGCSDHKYANRDRPCLDYDIGLCSAPCTGE
VSPAAYREDVATIRRFFRGETGVLAEPIREEMDRAADEAAFERAANLRDRLDVVESFHAG
GAKAIESTDHRTTDVLAVALEGDSATVARLHSNEGSLVDRERHTVETPDGKRAGDVLAAF
VPQYYAERDLPDRLLVSDRLSDDDVQSWLSDAGVDVRVPGAGREATLVDLALKNARRKTG
HEDGVTALADALGLDAADRTEGFDVSHTGGAGVVGSDVCFVDGSPEKPDYRRKKLAEGND
DYAAMRSLIGWRAERAIEGRDDRPDPDLLLIDGGEGQLAAAREALDAVGWDVPAVGLAKA
EERVITPERTFDWDDDTPQLRLLQRVRDEAHRFAVQYHTTLRDDVSTALDDVPGVGPELR
TRLLGRFGGVDGVRAASTAELRDVPGVGEATAKTIRRQL
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggactcggccgaggttcgatcacgtgctggcgatctcccgactgagcccggcgtctat
cagttcgtagatagttcggacgaggacgccactgttctctacgtcggcaaagccgtggct
ctccgggaccgcgtccgttcgtatgccgatccccggggtgagcgcatccggcggatggtc
gagcgcgccgccgatatcgacgttgtcgtcaccgacaccgagacgcaggcgctcctcctc
gaagcgaatctcatcaaacgccaccagccacggtacaacgtccggctgcgcgacgacaag
tcctatccgctcgtgcaactgaccgatcaccccgcgccacggatcgagatcacgcgtgat
ccagccgaaggtgcagacgtctttggcccgttcaccgacaagagtgacgtcgagaccgtc
gtcaaggcgattcgggagaccttcggcctccgtggctgttcggatcacaagtacgccaat
cgcgatcgcccctgtctggactacgacatcgggctctgctcggccccgtgtaccggcgag
gttagcccggcggcctaccgcgaggatgtcgcgacaatccgccggttcttccgcggggag
actggcgtcctcgcggagccgatccgcgaggagatggaccgggccgccgacgaagcggcg
ttcgaacgagcggcgaacctccgggaccgcctcgacgtcgtcgagtccttccacgcgggt
ggcgcgaaggccatcgagtcgaccgaccaccggacgaccgacgtgctggcggtcgccctg
gagggtgactcggcgacggtcgcgcgcctccacagcaatgaggggtcgctggtcgatcgg
gagcgccacaccgtcgagacgcccgacggcaagcgggccggcgacgtgctcgccgccttc
gtcccgcagtactacgctgaacgcgacctccccgaccgtcttctggtctccgaccgactg
agtgacgacgacgtgcaatcctggctatccgacgctggcgtcgacgttcgcgttccgggg
gccggtcgggaagcgacgctcgtcgacctggcgctgaagaacgcgagacgcaagacgggg
cacgaggacggtgtcaccgcgctcgccgacgccctcggtctcgatgctgccgaccggacc
gagggcttcgacgtgagccataccggcggcgcgggcgtcgtcggcagtgacgtctgtttc
gtcgacgggtcgcccgagaaacccgactatcgacgcaagaaactcgccgaaggcaacgac
gactacgcggccatgcggtcgctgatcggctggcgggccgagcgcgccatcgaagggcgg
gacgaccggccggatcccgatctgctcctgatcgatggcggcgagggacagctcgcggcc
gctcgcgaggccctcgacgccgtcggctgggacgtccctgcggtcgggctggcgaaggcc
gaagagcgggtgatcactcccgagcggacgttcgactgggatgacgacacaccacagttg
cgcttgctccagcgcgtccgcgacgaggctcaccgttttgccgttcagtatcacacgaca
ctcagggacgacgtgtcgacggcactcgacgacgtcccgggcgtcggtcccgaacttcgg
acgcggctgctggggcggttcgggggcgttgacggggtccgggcggcctcgacggcggaa
ctccgagacgtcccgggcgtcggtgaagcgacggcgaaaacgatccggcgacagctttga

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