Halorhabdus sp. BNX81: HBNXHr_1918
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Entry
HBNXHr_1918 CDS
T09448
Symbol
uvrC
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBNXHr_1918 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habn03400
]
HBNXHr_1918 (uvrC)
DNA repair and recombination proteins [BR:
habn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBNXHr_1918 (uvrC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_RNaseH
UvrC_M
HHH_5
HHH
GIY-YIG
UVR
HHH_2
DUF7508
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WEL21974
LinkDB
All DBs
Position
complement(1914960..1916699)
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AA seq
579 aa
AA seq
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MDSAEVRSRAGDLPTEPGVYQFVDSSDEDATVLYVGKAVALRDRVRSYADPRGERIRRMV
ERAADIDVVVTDTETQALLLEANLIKRHQPRYNVRLRDDKSYPLVQLTDHPAPRIEITRD
PAEGADVFGPFTDKSDVETVVKAIRETFGLRGCSDHKYANRDRPCLDYDIGLCSAPCTGE
VSPAAYREDVATIRRFFRGETGVLAEPIREEMDRAADEAAFERAANLRDRLDVVESFHAG
GAKAIESTDHRTTDVLAVALEGDSATVARLHSNEGSLVDRERHTVETPDGKRAGDVLAAF
VPQYYAERDLPDRLLVSDRLSDDDVQSWLSDAGVDVRVPGAGREATLVDLALKNARRKTG
HEDGVTALADALGLDAADRTEGFDVSHTGGAGVVGSDVCFVDGSPEKPDYRRKKLAEGND
DYAAMRSLIGWRAERAIEGRDDRPDPDLLLIDGGEGQLAAAREALDAVGWDVPAVGLAKA
EERVITPERTFDWDDDTPQLRLLQRVRDEAHRFAVQYHTTLRDDVSTALDDVPGVGPELR
TRLLGRFGGVDGVRAASTAELRDVPGVGEATAKTIRRQL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggactcggccgaggttcgatcacgtgctggcgatctcccgactgagcccggcgtctat
cagttcgtagatagttcggacgaggacgccactgttctctacgtcggcaaagccgtggct
ctccgggaccgcgtccgttcgtatgccgatccccggggtgagcgcatccggcggatggtc
gagcgcgccgccgatatcgacgttgtcgtcaccgacaccgagacgcaggcgctcctcctc
gaagcgaatctcatcaaacgccaccagccacggtacaacgtccggctgcgcgacgacaag
tcctatccgctcgtgcaactgaccgatcaccccgcgccacggatcgagatcacgcgtgat
ccagccgaaggtgcagacgtctttggcccgttcaccgacaagagtgacgtcgagaccgtc
gtcaaggcgattcgggagaccttcggcctccgtggctgttcggatcacaagtacgccaat
cgcgatcgcccctgtctggactacgacatcgggctctgctcggccccgtgtaccggcgag
gttagcccggcggcctaccgcgaggatgtcgcgacaatccgccggttcttccgcggggag
actggcgtcctcgcggagccgatccgcgaggagatggaccgggccgccgacgaagcggcg
ttcgaacgagcggcgaacctccgggaccgcctcgacgtcgtcgagtccttccacgcgggt
ggcgcgaaggccatcgagtcgaccgaccaccggacgaccgacgtgctggcggtcgccctg
gagggtgactcggcgacggtcgcgcgcctccacagcaatgaggggtcgctggtcgatcgg
gagcgccacaccgtcgagacgcccgacggcaagcgggccggcgacgtgctcgccgccttc
gtcccgcagtactacgctgaacgcgacctccccgaccgtcttctggtctccgaccgactg
agtgacgacgacgtgcaatcctggctatccgacgctggcgtcgacgttcgcgttccgggg
gccggtcgggaagcgacgctcgtcgacctggcgctgaagaacgcgagacgcaagacgggg
cacgaggacggtgtcaccgcgctcgccgacgccctcggtctcgatgctgccgaccggacc
gagggcttcgacgtgagccataccggcggcgcgggcgtcgtcggcagtgacgtctgtttc
gtcgacgggtcgcccgagaaacccgactatcgacgcaagaaactcgccgaaggcaacgac
gactacgcggccatgcggtcgctgatcggctggcgggccgagcgcgccatcgaagggcgg
gacgaccggccggatcccgatctgctcctgatcgatggcggcgagggacagctcgcggcc
gctcgcgaggccctcgacgccgtcggctgggacgtccctgcggtcgggctggcgaaggcc
gaagagcgggtgatcactcccgagcggacgttcgactgggatgacgacacaccacagttg
cgcttgctccagcgcgtccgcgacgaggctcaccgttttgccgttcagtatcacacgaca
ctcagggacgacgtgtcgacggcactcgacgacgtcccgggcgtcggtcccgaacttcgg
acgcggctgctggggcggttcgggggcgttgacggggtccgggcggcctcgacggcggaa
ctccgagacgtcccgggcgtcggtgaagcgacggcgaaaacgatccggcgacagctttga
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