KEGG   Halorhabdus sp. BNX81: HBNXHr_2039
Entry
HBNXHr_2039       CDS       T09448                                 
Symbol
fen1
Name
(GenBank) Flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
habn  Halorhabdus sp. BNX81
Pathway
habn03030  DNA replication
habn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:habn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBNXHr_2039 (fen1)
   03410 Base excision repair
    HBNXHr_2039 (fen1)
   03450 Non-homologous end-joining
    HBNXHr_2039 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:habn03032]
    HBNXHr_2039 (fen1)
   03400 DNA repair and recombination proteins [BR:habn03400]
    HBNXHr_2039 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:habn04147]
    HBNXHr_2039 (fen1)
DNA replication proteins [BR:habn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HBNXHr_2039 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HBNXHr_2039 (fen1)
DNA repair and recombination proteins [BR:habn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HBNXHr_2039 (fen1)
Exosome [BR:habn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HBNXHr_2039 (fen1)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N
Other DBs
NCBI-ProteinID: WEL22091
LinkDB
Position
complement(2020774..2021769)
AA seq 331 aa
MYSPTMGNADLRDIAVIEDVSFDELDGSVVAVDAHNWLYRYLTTTVKWTNDEVYTTDDGT
EVANLVGVVQGLPKFFEADVTPVFVFDGAVTDLKDDEVKRRREQREQYEDELAQARKEDD
PVKVARLESRTQRLTDVIVETTRELLALLDVPVVDAPAEGEGQAAYMARKGDVGYVGTED
YDALLFGAPYTLRQLTSSGDPELMDFEATLDEHGLSWEQLVDVALLCGTDFNEGVRGYGP
KTAVKAVREYGDLWGVSENEDVYVENADRIRELFLDPAVTDEYSIETAIEPDLAAAREFV
TDQWEVDADEVARGFERIESSVVQTGLEDWT
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtactcgccgacaatgggaaacgctgatctccgggacatcgccgtcatcgaggacgtt
agcttcgacgaactcgacggctcggtcgttgctgtcgacgcgcacaactggctgtatcgc
tacctcacgacgacggtcaagtggacgaacgatgaggtatataccactgacgacggcacg
gaggtggcaaacctggtcggcgtcgtccagggtctgccgaagttcttcgaggccgacgtc
acgcccgtgttcgtctttgacggtgcggttaccgacctcaaagacgacgaagtaaagcgc
cgacgcgaacagcgcgagcaatacgaggacgaactggcgcaagcccgcaaggaggacgac
cccgtcaaggttgctcgcctcgaatcccgtacccagcgcctgactgacgtcatcgtagag
accacccgggaactcctcgcgctgctcgacgtcccggtcgttgacgccccggcggagggc
gagggccaggctgcctacatggccagaaagggtgacgtcggatacgtcggtaccgaggac
tatgatgccttgctctttggcgcgccgtacacgctccggcaactcaccagttcgggcgac
cccgaactgatggacttcgaggcgacgcttgacgaacacggcctctcctgggagcaactc
gttgacgtcgccctgctctgtgggacggatttcaacgagggcgtccgtgggtacggcccc
aaaacggcggtgaaagccgtccgcgagtacggcgatctctggggcgtcagcgagaacgag
gatgtctacgtcgagaatgccgatcggatccgcgagctgtttctcgacccggcggtcact
gacgagtattccatcgagacggcgatcgaacccgatctggcagccgcccgtgagttcgtc
actgaccaatgggaggtcgacgccgacgaagttgcccgcgggttcgaacggatcgaatcc
tccgtggtccagaccgggctcgaagactggacgtag

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