Halorhabdus sp. BNX81: HBNXHr_2039
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Entry
HBNXHr_2039 CDS
T09448
Symbol
fen1
Name
(GenBank) Flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03030
DNA replication
habn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBNXHr_2039 (fen1)
03410 Base excision repair
HBNXHr_2039 (fen1)
03450 Non-homologous end-joining
HBNXHr_2039 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habn03032
]
HBNXHr_2039 (fen1)
03400 DNA repair and recombination proteins [BR:
habn03400
]
HBNXHr_2039 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
habn04147
]
HBNXHr_2039 (fen1)
DNA replication proteins [BR:
habn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HBNXHr_2039 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
HBNXHr_2039 (fen1)
DNA repair and recombination proteins [BR:
habn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HBNXHr_2039 (fen1)
Exosome [BR:
habn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HBNXHr_2039 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
WEL22091
LinkDB
All DBs
Position
complement(2020774..2021769)
Genome browser
AA seq
331 aa
AA seq
DB search
MYSPTMGNADLRDIAVIEDVSFDELDGSVVAVDAHNWLYRYLTTTVKWTNDEVYTTDDGT
EVANLVGVVQGLPKFFEADVTPVFVFDGAVTDLKDDEVKRRREQREQYEDELAQARKEDD
PVKVARLESRTQRLTDVIVETTRELLALLDVPVVDAPAEGEGQAAYMARKGDVGYVGTED
YDALLFGAPYTLRQLTSSGDPELMDFEATLDEHGLSWEQLVDVALLCGTDFNEGVRGYGP
KTAVKAVREYGDLWGVSENEDVYVENADRIRELFLDPAVTDEYSIETAIEPDLAAAREFV
TDQWEVDADEVARGFERIESSVVQTGLEDWT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgccgacaatgggaaacgctgatctccgggacatcgccgtcatcgaggacgtt
agcttcgacgaactcgacggctcggtcgttgctgtcgacgcgcacaactggctgtatcgc
tacctcacgacgacggtcaagtggacgaacgatgaggtatataccactgacgacggcacg
gaggtggcaaacctggtcggcgtcgtccagggtctgccgaagttcttcgaggccgacgtc
acgcccgtgttcgtctttgacggtgcggttaccgacctcaaagacgacgaagtaaagcgc
cgacgcgaacagcgcgagcaatacgaggacgaactggcgcaagcccgcaaggaggacgac
cccgtcaaggttgctcgcctcgaatcccgtacccagcgcctgactgacgtcatcgtagag
accacccgggaactcctcgcgctgctcgacgtcccggtcgttgacgccccggcggagggc
gagggccaggctgcctacatggccagaaagggtgacgtcggatacgtcggtaccgaggac
tatgatgccttgctctttggcgcgccgtacacgctccggcaactcaccagttcgggcgac
cccgaactgatggacttcgaggcgacgcttgacgaacacggcctctcctgggagcaactc
gttgacgtcgccctgctctgtgggacggatttcaacgagggcgtccgtgggtacggcccc
aaaacggcggtgaaagccgtccgcgagtacggcgatctctggggcgtcagcgagaacgag
gatgtctacgtcgagaatgccgatcggatccgcgagctgtttctcgacccggcggtcact
gacgagtattccatcgagacggcgatcgaacccgatctggcagccgcccgtgagttcgtc
actgaccaatgggaggtcgacgccgacgaagttgcccgcgggttcgaacggatcgaatcc
tccgtggtccagaccgggctcgaagactggacgtag
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