Halorhabdus sp. BNX81: HBNXHr_2077
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Entry
HBNXHr_2077 CDS
T09448
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn00730
Thiamine metabolism
habn01100
Metabolic pathways
habn01240
Biosynthesis of cofactors
Module
habn_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HBNXHr_2077 (thiC)
Enzymes [BR:
habn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HBNXHr_2077 (thiC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
WEL22129
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Position
complement(2053241..2054686)
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AA seq
481 aa
AA seq
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MMATQLQRARDGEVTPAMERVAERENRDPEYVREKVAAGEAVIPNNHEHESIDPMIIGKD
FSTKINANIGNSEPESDIETEREKLHTAVEYGADTVMDLSTGGDIPELRAGQIEHSPVPL
GTVPIYEALKQAGSPEDLTADLLLDVIESQAAQGTDYQTIHAGVLKEHLPLTDGRITGIV
SRGGSILAEWMENHGEQNPLYTHFDEICAILAEYDVTISLGDGLRPGSLADANDDAQLAE
LETLGELTQRAQDQGVQVMVEGPGHVPLDEIGEHVRHQQEVCDGAPFYLLGPLVTDVAPG
YDHITSAIGATEAARHGAAMLCYVTPKEHLGLPDAEDVRDGLAAYRIAAHAGDVAAGKPG
ARDWDDAISEARYNFDWHEQFNLALDPDRAKEYHDQTLSEDNYKDARYCSMCGAEFCSMR
IDQDAREGEEMAGLDADVDLADSAAADVNLPPTGKHDTSGLPTVPEALCDHAGGEGLPGD
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgacacaactacagcgcgcacgcgacggtgaggtcacgccggcgatggagcgc
gtcgccgagcgagagaaccgcgatcccgagtacgtccgcgaaaaggtcgccgcgggcgag
gctgtgattccgaacaaccacgagcacgagtcgatcgacccgatgatcatcgggaaggac
ttttcgacgaagatcaacgccaacatcggcaacagcgaacccgaaagcgatatcgaaacc
gaacgggagaaactccacacggccgtcgaatacggcgcggacacggtgatggatctctcg
acgggcggtgacattccggaacttcgcgccggccagatcgaacactcgccggtgccgctc
gggacagtgccgatctacgaggcgctaaagcaggccggatcgcccgaggatctcacggcg
gacctcctcctggacgtgatcgagtcccaggctgctcaggggactgattaccagaccatc
cacgccggcgtcctcaaagaacacctcccgctgaccgacggtcgcatcaccgggatcgtc
tcccgtggggggtcgatcctcgccgaatggatggaaaatcacggcgagcagaaccccctg
tacacccatttcgacgagatctgtgcgatcctcgccgagtacgacgtgacgatcagtctc
ggcgacggcctgcggcccggatcgctcgccgacgccaacgacgacgcccagctggcggaa
ctggagacgctgggcgaactgacccagcgcgcccaggatcagggcgttcaggtcatggtc
gaagggccgggccacgtcccgctggacgaaatcggcgagcacgtccgccaccagcaggag
gtctgtgacggcgcgccgttctacctgctgggcccgctggtgaccgacgttgcaccgggc
tacgaccacatcacgagcgcgatcggcgcgaccgaggccgcccgccacggcgcggcgatg
ctctgctacgtcacacccaaagagcacctcggtttgcccgacgccgaggacgtccgggac
ggcctggcggcctaccggatcgcagctcatgcgggcgacgtggcggccgggaaaccgggc
gcacgcgactgggacgacgccatctcggaagcccggtacaacttcgactggcacgagcag
ttcaacctcgcgctggaccccgaccgcgctaaggagtaccacgatcagaccctatcggag
gacaactacaaggacgcccgctactgctcgatgtgtggcgcggaattttgctcgatgcgg
atcgaccaggacgcccgcgagggagaggagatggcgggactggacgccgatgttgatctc
gcagactcggcggcagccgacgtcaacctgccgccgacgggcaaacacgatacaagtggc
ctgcccacggtgcccgaggcgttgtgtgaccacgccgggggcgagggtttgccgggcgac
gactga
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