Halorhabdus sp. BNX81: HBNXHr_2085
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Entry
HBNXHr_2085 CDS
T09448
Name
(GenBank) DNA excision repair protein ERCC-2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03022
Basal transcription factors
habn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HBNXHr_2085
09124 Replication and repair
03420 Nucleotide excision repair
HBNXHr_2085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habn03021
]
HBNXHr_2085
03036 Chromosome and associated proteins [BR:
habn03036
]
HBNXHr_2085
03400 DNA repair and recombination proteins [BR:
habn03400
]
HBNXHr_2085
Enzymes [BR:
habn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HBNXHr_2085
Transcription machinery [BR:
habn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HBNXHr_2085
Chromosome and associated proteins [BR:
habn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HBNXHr_2085
DNA repair and recombination proteins [BR:
habn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HBNXHr_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_22
nSTAND_NTPase5
AAA_30
AAA_11
Utp25_C
Ble-like_N
Motif
Other DBs
NCBI-ProteinID:
WEL22137
LinkDB
All DBs
Position
2059575..2062016
Genome browser
AA seq
813 aa
AA seq
DB search
MGTRDETDAAWQEVFGFGQPYDDQADAIEAAITAGRRRGFLAMEGPCGTGKTMAALTAGA
TLVREDDYERLLVVTPVKQQRRQFVADLRQLNAGLSEPLAGVALVGKRDLCPYGREDVFP
PDASVHDRCEDLRENTADLVESNGSSDDRPVADAVIRPRNDDVWWDPQTGSDLAKAARPG
GSGQQAIAGTLSTADAQSPYRRTQPTAPDEIGGEDPPLYCPFEADWYARNRGSPFGFSAG
EKHVVTAAEYLPGAVERGTCPHRAMQTLVGAADVVIGNYNHLFDPASRGLIEGILDERTF
VIVDEAHRLEERVRDLLSDRLGRQTIVQARNDCHQLLSLARQSEDHKREVRAHLGSQDVP
LEAVERAQDFYDDLLGWLDDRIAEHLDSEVGRNWRADEGALPEHSLEIPLRNPDEPEPDE
LTRWAEQAGYDGGLFRQLDTIGLAVEDASEELGIGRTPVVAAAGVIASRWWERDHATAFR
EIELDHSPRDDQRIEGWRSTYTAGLTLFDCLPAESLASTFDDVGGGMLMSATLAPLDVFT
RVAGLDALADGNEDTSEQPPDPAQDDGRPVLTRSYGLSFPPANRASWIVDATPFTARNRG
DPATMEPLGNEWNSTRDEYAHVLRAIARNPGNVLIAMPNYREATWAGAYLDDTVEKPVLV
DESSSNEATEDLKGEFFAGEGKVLVTSTRGTLTEGVDYDGAKLRAAAVVGVPLVNIGSPR
VRAVQRAYGDVFGEDHAFEYALTIPAVRRARQAIGRVIRGAEEVGVRALVGARYTPDARH
SVYGYLSPAEREEFVTMSPEFLPDQIDRFWADR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcgggacgaaaccgacgcggcctggcaagaggtgttcgggtttggccagccc
tacgacgatcaggccgacgcgatcgaggcggcgatcacagcgggtcgccgaaggggtttt
ctcgcgatggaaggcccctgcgggactggcaagacaatggctgccctcaccgccggcgcg
acgctcgtccgcgaggacgactacgagcgactgctcgtcgtgacgccggtcaaacagcaa
cgccgccagttcgtcgccgacctccgacaactcaacgctggcctgtcggaaccactcgcc
ggcgtggcgcttgtcggcaaacgcgacctctgtccctatggccgcgaggacgtcttcccg
cccgacgccagcgtccacgatcgctgtgaggatctccgggagaacacggccgatctcgtc
gagagcaacggatcgagcgacgaccgccccgtcgccgacgccgtgatccgcccgcggaac
gacgacgtgtggtgggacccacagacgggcagcgacctggcgaaagccgcccgacccggc
gggagcggccagcaggcgatcgccggcacactgtcgaccgccgacgcgcaatccccctat
cgccgcacccagccgaccgcccccgacgagatcggcggcgaggacccgccgctttactgc
cccttcgaggctgactggtacgcccgcaaccgcggctcgccgttcggcttttccgccggc
gagaagcacgtcgtcactgcagcggagtacctgcccggagccgtcgagcgcgggacctgt
ccccaccgggcgatgcagacactcgtcggggccgccgacgtggtgatcggcaactacaac
cacctcttcgaccctgcttccaggggactgatcgaaggtattctcgacgagcggacgttc
gtgatcgtcgacgaggcccaccgcttggaggagcgcgtccgggacctgctgtcggaccga
ctcggccgccagacgatcgtccaggcgcgcaacgactgtcatcagttgctctcgctggcc
cgccagagcgaggatcacaaacgcgaggtccgggcccacctcggcagccaggacgtgcca
ctcgaggccgtcgagcgtgcccaggatttctacgacgacctgctgggctggctcgacgat
cggatcgcggaacatctcgatagcgaggtaggtcgaaattggcgggccgacgagggcgcg
ctgccggagcatagtctggaaatcccgctacgcaatcccgacgagcccgaacccgacgaa
ctcacacggtgggccgaacaggcgggttacgacggcggcctctttcggcaactcgatacg
atcgggctggccgtcgaggacgcgagcgaggaacttggtatcgggcggacgccagtcgtc
gccgcggcgggcgtgatcgccagccggtggtgggagcgcgatcacgcgacggcgttccgg
gagatcgaactcgatcactccccccgcgacgaccagcgcatcgaaggctggcgatcgacc
tacaccgccgggctgacgctgttcgattgcttgccggcggaatcgctcgcgtcgacgttc
gacgacgtgggcgggggcatgctgatgagcgcgacgctggccccactcgacgtgttcacg
cgcgtggccgggctggacgcgctggcagacggaaacgaggacaccagcgagcaaccccca
gacccagcccaggacgacggccgtcccgtcctgacgcgctcctatggcctctcctttccg
ccggcgaaccgcgccagttggatcgtcgacgcgacgccgttcaccgcgcgaaatcgtggt
gaccccgcaacgatggaaccgcttggcaacgagtggaactcgacccgcgacgagtacgcc
cacgtcctccgggccatcgcgcgcaacccgggcaacgtcctgatcgcgatgccgaactac
cgcgaggcgacctgggccggcgcgtatctcgatgacacggtcgagaagcccgtcctcgtc
gacgagagttccagcaacgaggcgaccgaggatctcaaaggcgagttcttcgccggcgag
gggaaagtactggtcacgagcacgcggggcacgctcacggagggcgtcgactacgacggc
gcgaagttgcgagcggcggcggtcgtcggtgtccccttagtcaacatcggctcgccccgt
gtccgggcggtccaacgcgcctacggcgacgtcttcggcgaggaccacgccttcgagtac
gcgctgacgatccccgcggtcagacgcgcccggcaggcgatcggtcgagtcattcgcgga
gctgaggaggtgggcgtccgggcgctggtcggggcacggtacacgcccgacgcccggcat
tcggtctacggctacctctcgccggccgaacgcgaggagttcgtgacgatgagtccggag
ttcctgccggaccagatcgatcggttctgggcggatcggtga
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