Halorhabdus sp. BNX81: HBNXHr_2237
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Entry
HBNXHr_2237 CDS
T09448
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
habn
Halorhabdus sp. BNX81
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
habn03016
]
HBNXHr_2237 (truB)
Enzymes [BR:
habn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HBNXHr_2237 (truB)
Transfer RNA biogenesis [BR:
habn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HBNXHr_2237 (truB)
Prokaryotic type
HBNXHr_2237 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
Pus10_C
PUA
Motif
Other DBs
NCBI-ProteinID:
WEL22284
LinkDB
All DBs
Position
complement(2244134..2244910)
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AA seq
258 aa
AA seq
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MRDLATVERAAHAGTLDPKVTGCLPMLLGDATRMAQVFDDSDKAYIAVLELHERLADPAT
LEAVADEFEGELYQKPPKKSAVVRRLRSRKIHSLDVLEAEDRRALISIRCESGTYIRKLC
HDMGLALGTGAHMGDLRRTATDPFDDSDLVTMHDFVDALAWWREDDDPDPLREVVQPAER
ALVDLPSVTIAPSAAESVAEGAPVYAPGVIDADDGLDPAAEPLVACYIPNGAAVCLGTLA
GDPDADEGTVVELERVLV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgatcttgcgaccgtcgagcgggcggcccacgccgggacgctcgacccaaaagtc
accggctgtctcccgatgttgctcggcgacgccacccgcatggcccaggtcttcgacgat
agcgacaaggcgtacatcgccgtgctcgaactccacgaacgactggccgaccccgccacc
ctcgaagccgtcgccgacgagttcgagggcgaactctaccagaaaccgccgaagaaaagc
gccgtcgtccgtcggctgcgctcccggaagatccacagcctggacgtcctcgaagccgag
gatcgccgcgcactcatctcgatccggtgtgagagtggcacctacatccggaaactctgt
cacgacatggggctggcgctgggcaccggcgcgcacatgggcgatctccgccggacggcg
accgaccccttcgacgatagcgatctggtgacgatgcacgacttcgtcgacgccctggcg
tggtggcgcgaggacgacgaccccgacccactacgggaggtggtccagcccgccgaacgc
gcgctggttgatctcccgtcggtcacgattgccccgagtgccgcggaatccgtggcggag
ggtgcccccgtctacgcgccgggcgtcatcgacgccgacgacggcctcgatcccgccgcc
gaaccgctcgtcgcctgctacattcccaacggcgctgcggtgtgtctggggaccctcgcg
ggggacccggacgccgacgaggggaccgttgtcgaactggaacgcgtgctcgtctaa
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