Halorhabdus sp. BNX81: HBNXHr_2406
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Entry
HBNXHr_2406 CDS
T09448
Symbol
sua7-5
Name
(GenBank) Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HBNXHr_2406 (sua7-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habn03021
]
HBNXHr_2406 (sua7-5)
Transcription machinery [BR:
habn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HBNXHr_2406 (sua7-5)
Prokaryotic type
Archaeal type
TFB
HBNXHr_2406 (sua7-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
RB_B
Motif
Other DBs
NCBI-ProteinID:
WEL22449
LinkDB
All DBs
Position
2392045..2392866
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AA seq
273 aa
AA seq
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MRDGREAICQDCGLVVSEVQVDHGPEWRSFDDDSTDRRRTGPPISRSRHDHGLSTRIGRD
RGAPPRRRRRIARLRRQHRRSQTSSKAERNLMYGIMEIRRLVGRLSLSRNFRDEACVLFE
TAQGDGLLHGRSIEGMAAAAVYAVCRIAGVSRTIEEITTVAHASESELTVAYAAINRELG
LETGPIDPREYLPRFASRLDLHVDIERRARELAAFVSEENLAGGRAPSGVAAACLYTAAC
ERNIDVTQREVADVAGVAPATLRSTYQDVHSNA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacggtcgtgaagcgatctgccaggactgcgggctggtcgtctcggaagtgcag
gtcgaccatggaccggaatggcgatcgttcgatgacgactcgaccgaccgacgacggacc
ggaccgccgatctcgcggtcgcgtcacgatcacgggttgtcaacccggatcgggcgtgat
cgtggcgcaccgccgcgacgccgacgccggatcgcgcggttgcgccgccaacatcgtcgg
tcccagacgtcttcgaaggccgagcggaacctgatgtacggcatcatggagatccgccgg
ctcgtcggccggttgtcactgtctcgaaacttccgtgacgaggcgtgcgtcctgttcgaa
acagcccagggggacgggctgttgcacgggcgctctatcgaggggatggctgccgccgcg
gtgtacgccgtgtgtcgcatcgccggcgtctcgcggacgatcgaagagatcacgacggtc
gcccatgcgagcgaaagcgaactcacagtggcctacgctgccatcaaccgcgaactgggg
ctggaaaccgggccgatcgatccccgggaatacctgccccggttcgccagtcggctcgac
ctccacgtcgacatcgagcgtcgggctcgtgaactcgcggcgttcgtctccgaggagaat
ctggccggcggccgtgcgccgagcggggtggcagcagcgtgtctatatacggcggcctgt
gagcggaacatcgacgtcacgcaacgcgaggttgcggatgtcgccggggtggcacccgca
acactcaggtcgacgtatcaggacgtgcacagcaacgcctaa
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