Halorhabdus sp. BNX81: HBNXHr_2475
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Entry
HBNXHr_2475 CDS
T09448
Symbol
idsA4
Name
(GenBank) Geranylgeranyl diphosphate synthase, type I
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn00900
Terpenoid backbone biosynthesis
habn01100
Metabolic pathways
habn01110
Biosynthesis of secondary metabolites
Module
habn_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HBNXHr_2475 (idsA4)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
HBNXHr_2475 (idsA4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
habn01006
]
HBNXHr_2475 (idsA4)
Enzymes [BR:
habn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HBNXHr_2475 (idsA4)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HBNXHr_2475 (idsA4)
2.5.1.29 geranylgeranyl diphosphate synthase
HBNXHr_2475 (idsA4)
Prenyltransferases [BR:
habn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HBNXHr_2475 (idsA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WEL22518
LinkDB
All DBs
Position
complement(2463698..2464738)
Genome browser
AA seq
346 aa
AA seq
DB search
MTDTVDSQAVMEAIEWRRGQVNDAIPENLPVVEPKKLYEASRYLLDAGGKRLRPTILLLV
AESIADVPPRSEPYREFPAAEGPIDMMSAAVSIEIIQSFTLIHDDIMDDDDMRRGVPAVH
REFDLSTAILAGDTLYAKAFENMLETGSTGDRSVRALSELATTCTQICEGQSMDIEFETD
ETVTTEDYLEMVELKTAVLYAAAASIPAILMGEDDYVDPLYQYGLNIGRGFQIQDDLLDL
TTPSEKLGKQRGSDLVENKRTIITVHARNQGVDVENLVPTDDVEAVDEATIDEAVAELEE
AGSIDFARETAEGLIRDGKRNLEVLPDNESRDLLEGIADFLIEREY
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacggatactgtcgactcgcaggcggtcatggaggcgatcgagtggcgacgcgggcag
gtcaacgacgcgattcccgagaacctcccggtcgtcgagcccaagaagctctatgaggcc
tcgcggtacctgctggacgccggcggcaagcgactccggccgacgatcctgctgctcgta
gccgagtcgatcgccgacgttcccccgcggagcgagccgtatcgggagttcccggctgcc
gagggcccgatcgacatgatgtccgccgcggtgagtatcgagatcatccagtcgtttacc
ctcatccacgacgacatcatggacgacgacgacatgcgtcgcggggtcccggccgtccac
cgggagttcgacctctcgacggcgattctcgcgggcgacaccctctacgcgaaggccttc
gagaacatgctcgaaaccgggtcgaccggcgaccggtcggtccgggcgctgtcggaactc
gcgacgacctgtacccagatctgtgagggccagtcgatggacatcgagttcgagaccgac
gagacggtcacgaccgaggactacctggagatggtcgaactcaaaaccgcagtgctgtac
gccgccgcggcgtcgatccccgcgatcctgatgggcgaggacgactacgtcgatccgctc
tatcagtacggcctcaacatcgggcgtggcttccagatccaggacgacctgctggatctg
acgacgccgagcgaaaagctgggcaagcagcgcggcagcgacctcgtcgagaacaagcgc
acgatcatcaccgtccacgcccgcaatcagggcgtcgacgtcgaaaatctcgtcccgacc
gacgacgtcgaagccgtcgacgaggcgaccatcgacgaggccgttgccgagctagaggaa
gccggcagtatcgacttcgcccgcgagacggccgagggactcatcagggacggcaaacgg
aacctcgaagtgctccccgacaacgagtcccgggatctgctggaagggatcgcggacttc
ctgatcgaacgcgagtactga
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