Halorhabdus sp. BNX81: HBNXHr_2506
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Entry
HBNXHr_2506 CDS
T09448
Symbol
eRF1-2
Name
(GenBank) Peptide chain release factor eRF1
KO
K03265
peptide chain release factor subunit 1
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HBNXHr_2506 (eRF1-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
habn03019
]
HBNXHr_2506 (eRF1-2)
03012 Translation factors [BR:
habn03012
]
HBNXHr_2506 (eRF1-2)
Messenger RNA biogenesis [BR:
habn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HBNXHr_2506 (eRF1-2)
Translation factors [BR:
habn03012
]
Eukaryotic type
Release factors
HBNXHr_2506 (eRF1-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Zn_ribbon_8
RbpA
Motif
Other DBs
NCBI-ProteinID:
WEL22549
LinkDB
All DBs
Position
2488775..2490028
Genome browser
AA seq
417 aa
AA seq
DB search
MSSQEGHGEQSDRQKYEFRKVIEELEDYDGSGTQLVTIYVPDDTLISDVVAHVTQEHSEA
SNIKSKDTRTNVQDALKSIKDRLRYYDNKPPENGLVLFSGAVDTGGGRTDMITRVLESPP
QPVQSFRYHCDSDFLLEPLEGMLEDKGLFGLIVLDRREANVGWLRGKRVDPVKSASSLVP
GKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVPERHDLDGILVGGPSPTKDEFLD
GDYLHHEIGDMVLGKFDVAYTDESGLHDLVDAAEDVLAEHEMLQDKQVMERFFKELHDGD
LATYGFDQTRQNLMMGSVEQLLISEDLRKDAVTYECPNGHEEHELVDRSTETPAHTCTTC
GETVETGEREDAIEHLISIAEQRGTETVFVSTDFEKGEQLLTAFGGVAGILRYSTGI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccaggaagggcacggggaacagagtgaccgccagaaatacgagttccggaaa
gtgatcgaggaactcgaagactacgacggcagcggcacccagctggtgaccatctacgta
cccgacgacacgctgatcagcgacgtggtggcccacgtcacccaggagcacagcgaagcg
agcaacatcaagtccaaggacacccggacgaacgtccaggacgcgctaaaaagcatcaag
gaccgactccggtattacgacaacaagccgccggaaaacggcctcgtgctgttctccgga
gccgtcgacaccggcggtggccggacggacatgatcactcgcgtcctcgaaagtccaccc
cagcccgtccagtcgttccgctatcattgcgactctgatttcctgctcgaaccgctggaa
ggcatgctcgaggacaagggcctgttcggcctgatcgtcctcgatcgccgggaggccaac
gtcggctggctccggggcaagcgcgtcgacccagtcaagtccgcctcctcgctcgttccc
ggcaagcagcgcaaaggtggtcagtccgcacagcgcttcgcccggttgcggctggaagcg
atcgacaacttctaccaggaggtcgcgggcatggccaacgacctgttcgtccccgagcgc
cacgatctcgatggcatcctcgtgggcgggccctcgccgacgaaagacgagttcttagac
ggcgattacctccatcacgaaatcggcgacatggtgctggggaagttcgacgtcgcctac
accgacgagtcgggactgcacgacctcgtcgacgccgccgaggacgttctcgccgaacac
gagatgctccaggacaagcaggtcatggagcgcttcttcaaggaactccacgacggcgat
ctggcgacctacgggttcgaccagacccgccagaacctcatgatggggtcggtcgaacaa
ctcctcatcagtgaggatctccgaaaggacgccgtcacctacgagtgtccgaacggccac
gaggaacacgaactcgtcgaccgaagcaccgagaccccggcacacacctgtacgacctgc
ggcgagaccgtcgagactggtgaacgggaggacgccatcgaacacctgatctcgatcgcc
gaacagcgcgggaccgagacggtcttcgtctcgacggacttcgagaagggcgaacagcta
ctgacggccttcggcggcgtcgccggtattctgcggtactcgacgggtatctga
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