Halorhabdus sp. BNX81: HBNXHr_2579
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Entry
HBNXHr_2579 CDS
T09448
Symbol
holB2
Name
(GenBank) ATPase involved in DNA replication HolB, small subunit
KO
K04801
replication factor C small subunit
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBNXHr_2579 (holB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habn03032
]
HBNXHr_2579 (holB2)
DNA replication proteins [BR:
habn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
HBNXHr_2579 (holB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Intein_splicing
DNA_pol3_delta2
Rad17
RuvB_N
AAA_assoc_2
RCF1-5-like_lid
AAA_14
AAA_18
ResIII
nSTAND3
AAA_16
AAA_7
AAA_24
AAA_2
NB-ARC
RNA_helicase
TsaE
Viral_helicase1
ThiN
EGF_LMN_ATRN
TIP49
IstB_IS21
NACHT
Motif
Other DBs
NCBI-ProteinID:
WEL22620
LinkDB
All DBs
Position
complement(2563119..2565404)
Genome browser
AA seq
761 aa
AA seq
DB search
MSEAESTRAGRQEVWIEKYRPQTLEDIAGHEAIVERLGSYVSRNDLSHMLFAGPAGVGKT
TAATAIARELYGEDWEENFLELNASDERGIDVVRDRVKSFARTSFGGYDYRIIFLDEADA
LCVPPGTEVVTGYPSKPEVKNIEDVAEDGEPIPSVDFETNEIQSDKGHRVDSGVADFFEL
ELADGRTIQASLSHPFFVVDEGGKLVEKELQELEPGDEIADFKDDIGVSRCESCSDWTAG
RFCSVSCKDQGHSREMQGEGNPMYGTEWSAERREKIVEKLSDGRLEGEDNPNYGGDFHGV
SVWEMDEESIERFCDNLSEKRSGTSWDEWVVDADPEAVKERIGRSSAQWWANLDEDRKDE
IVQKATEACEYPVCDITGDNNPMRDPEVAQKVSEALQGHEPTGGNIRHSDELGHLVRSDW
EYEVAKALQDAGVEYEYEPEFELSESVFHPDFLIGDTVVEVKGSAKLWGQTEKVKEFLET
YGEEYTFVVVGDGELPHHEHYERDEFEPALVTDGGLEAVETVTVRNIEYSHRGKAYNISM
EGTPNFMLANGILTHNTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRF
SPLADEAVEAQIRQIAQEEVIDVTEDGIEALVYVAGGDMRKAINGLQAASMSGDTVTEEA
VFEITSTARPEDIREMVDLALDGDFTAARSRLDTLLTEEGIAGGDIIDQLHRTVWEFDLS
DAAAVRVLDRVGEADYRITEGASERIQLEALLASLALDGRE
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggccgagtcaacccgggcgggtcgacaggaagtctggatcgagaagtaccgc
ccacaaaccctcgaagacatcgcgggccacgaggccatcgtcgagcgactgggcagctac
gtctcacgcaacgacctcagccacatgctgttcgccgggccggccggcgtcggcaagacg
accgctgcgaccgccatcgcccgcgaactctacggcgaggactgggaggagaacttcctc
gaactcaacgcctctgacgagcgcgggatcgacgtcgttcgcgaccgcgtcaagagtttc
gcgcgcacttcttttggcggctacgactaccgaattatattcctcgacgaggccgacgca
ctatgcgtgccgcctggaactgaggttgttacgggatatccgtcaaaaccggaggtaaaa
aatatcgaagacgtggcggaagacggagagccgattccatccgtcgatttcgagaccaac
gagatccaatccgacaagggacaccgtgtcgattccggcgtcgcggatttctttgaactc
gaacttgcggatggacggaccatccaggcgagcctctcgcatccgtttttcgtggtcgat
gaaggtgggaaactcgtcgagaaagagctacaggaactggagccgggtgacgagatcgcg
gacttcaaagacgacatcggcgtttcgcggtgtgaatcctgtagcgactggaccgcggga
cggttctgttcggtttcctgcaaggaccagggacacagtcgtgagatgcaaggtgagggc
aatcccatgtatgggacggagtggtccgcggaacgacgcgagaaaatcgttgagaagctc
tccgacgggagacttgaaggtgaagacaacccgaactacgggggcgatttccacggtgtc
tccgtctgggaaatggacgaagaaagcatcgaacgcttctgtgacaatcttagcgagaaa
cgatccgggacttcgtgggacgagtgggtcgttgacgccgaccccgaagcggtgaaagaa
aggatcggtcggtcgagcgcgcagtggtgggcgaatctggacgaggacaggaaagacgaa
atcgtccaaaaagcgaccgaggcgtgtgagtacccggtctgtgacatcaccggcgataac
aacccgatgcgtgaccccgaggtcgcacagaaggtttcggaagcgttgcaggggcacgaa
ccaaccggcgggaacatcagacacagcgacgaactcggccatctcgtccgatccgactgg
gagtacgaggtcgcgaaggcgttgcaggatgcaggcgtcgaatacgagtacgaaccggag
tttgaactctccgaatcagtgttccatcccgatttccttatcggcgataccgtcgtggag
gtcaaaggctccgccaagttgtggggccagaccgagaaggtgaaggaattcctggaaacg
tacggtgaggagtacacgtttgtcgtcgtcggggacggcgaacttccgcatcacgaacac
tacgagagagacgagttcgaacctgctctcgtgaccgacggtggactggaggccgtcgaa
acggtcacggttcgaaatatcgaatacagccatcgtgggaaggcgtacaacatcagcatg
gaggggacgccgaacttcatgctcgccaatgggattttgacccacaatactagcgacgcc
cagtcagcgcttcgccggacgatggagcagttctcgaacaacgtccgctttatcctctcg
tgtaactactccagtcagatcatcgacccgatccagtcgcggtgtgccgtcttccggttc
tcgccgctcgccgacgaggccgtcgaggcccagatccgccagatcgcccaagaggaagtc
atcgacgttaccgaggacgggatcgaggcgctggtctacgtcgccggcggtgacatgcga
aaggcgatcaacgggctccaggccgcgtcgatgtccggggatacagtcaccgaggaagcg
gtcttcgagattacgtcgacagcccggcccgaagacatccgcgagatggtcgacctcgca
ctggacggcgacttcactgccgctcgatcgcgtctcgacaccctgttgaccgaggaaggg
atcgccggcggcgacatcatcgaccagcttcaccgcaccgtctgggagttcgacctctcg
gatgcggcggcggtccgcgtcctcgatcgcgtcggcgaagccgactaccggatcaccgag
ggggcgagcgaacggatccagctcgaggccctgctcgcttcgctcgcactcgacggtcgg
gaatga
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