Halorhabdus sp. BNX81: HBNXHr_2585
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Entry
HBNXHr_2585 CDS
T09448
Symbol
sua7-6
Name
(GenBank) Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HBNXHr_2585 (sua7-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habn03021
]
HBNXHr_2585 (sua7-6)
Transcription machinery [BR:
habn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HBNXHr_2585 (sua7-6)
Prokaryotic type
Archaeal type
TFB
HBNXHr_2585 (sua7-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_tTFIIB
UMPH-1
DZR
Zn_ribbon_LysW
Trm112p
HTH_11
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
WEL22625
LinkDB
All DBs
Position
2570531..2571535
Genome browser
AA seq
334 aa
AA seq
DB search
MSGTNSVRTVSEHRATERNAESKQSGRVETCPECGGTVTTDDGRGERVCEQCGVVVESDA
IDHGPEWRAFTPAEKDERSRVGSPTTKLLHDEGLSTSIGWADKDASGRTLSSSQREKMSR
LRVWDERFRATDSRDRNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGRSI
EGMATASLYAAARQAGTPRSLDEFEPISRVRRQKYSRAYRYLARQLELGIAPADPAEYLP
RFTSDLELGDELERQARELLSELKKTGEHSGKNPTGLAAGAIYAAGLLTGDRITQQEVAE
TADVSEVTIRDRYSELLEALEGDQIDARSERGGN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaccaattcggtacgaacggtatccgagcaccgcgcaaccgagcggaacgcc
gaaagcaagcagtccggccgggtcgagacctgtccggagtgtggcgggacagtcacaacc
gacgacgggcgtggcgagcgtgtctgcgagcagtgtggtgtcgtcgtcgagagtgacgcg
atcgatcatgggccggagtggcgggcgtttacccccgccgagaaggacgaacggagccgg
gtcgggtcgccgacgacgaagctcctccacgacgaggggctctcgacgagcatcggctgg
gcggacaaggacgcaagcggccgcacgctctcgtcgtcccagcgcgagaagatgagtcgg
cttcgggtctgggacgagcgctttcgtgcgacggactcccgggatcgcaatctcaagcaa
gcgcttggcgaaatcgaccggatggccagtgcgcttggcctcccggagaacgttcgggaa
accgcgagcgtgatctatcgccgggccttggacgagaatctcctgcccggtcggtcgatc
gaggggatggcgacggcgtcgctgtatgccgccgcccgccaggccgggacgccccggagt
ctcgacgagttcgagcccatcagtcgcgtccgccgccagaagtattcccgcgcctatcgg
tatcttgcccgccaactcgaactcgggatcgccccggccgatccggcggagtacctgccg
cggttcacgtccgacctcgaactgggcgatgaactcgaacgacaggcacgggaactactc
tcggaactcaaaaagacgggcgaacacagcgggaaaaacccgaccggccttgctgccggt
gcgatctacgccgccggactgctgaccggtgaccgcatcacccagcaggaagtcgccgag
acggccgacgtcagcgaagtcacgatccgggaccggtactccgagttgctcgaagccctc
gaaggcgatcagatcgacgctcgcagcgaacgcggcgggaactga
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