Halorhabdus sp. BNX81: HBNXHr_2802
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Entry
HBNXHr_2802 CDS
T09448
Symbol
dnaN
Name
(GenBank) DNA polymerase sliding clamp subunit (PCNA-like)
KO
K04802
proliferating cell nuclear antigen
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03030
DNA replication
habn03410
Base excision repair
habn03420
Nucleotide excision repair
habn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBNXHr_2802 (dnaN)
03410 Base excision repair
HBNXHr_2802 (dnaN)
03420 Nucleotide excision repair
HBNXHr_2802 (dnaN)
03430 Mismatch repair
HBNXHr_2802 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habn03032
]
HBNXHr_2802 (dnaN)
03400 DNA repair and recombination proteins [BR:
habn03400
]
HBNXHr_2802 (dnaN)
DNA replication proteins [BR:
habn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HBNXHr_2802 (dnaN)
DNA repair and recombination proteins [BR:
habn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HBNXHr_2802 (dnaN)
MMR (mismatch excision repair)
Other MMR factors
HBNXHr_2802 (dnaN)
TLS (translesion DNA synthesis) factors
Other TLS factors
HBNXHr_2802 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
WEL22832
LinkDB
All DBs
Position
complement(2795414..2796157)
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AA seq
247 aa
AA seq
DB search
MFNAIVSADTLRTALDSVSVLVEECKLRLEEDGLEIRAVDPANVGMVDLTLSAAAFESYE
TDGGVIGVNLSRLEDIAGMADSDQLIHLELDEETRKLEIAIDGLEYTLALIDPDSIRQEP
DLPDLDLASEIVLEGRDVDRAVTASDMVSDHVALGVDETDELFYVDAEGDTDDVHLELGR
EDLIDLTAGSARSLFSLDYLKDMNKAIPNDAEVTMELGEEFPVKMHFDIAEGQGSVTYML
APRVQSD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgccatcgtgagtgcggacacgctacggacggcactggactccgtcagcgtg
ctggtcgaggagtgtaagctgcggctcgaagaggacgggctggagatccgagcggtcgac
ccggccaacgtcggcatggtcgacctgacgctgtcggctgccgccttcgagtcctacgag
accgacggcggcgtcatcggggtcaatctctcgcggctcgaagacatcgccgggatggcc
gattccgaccaactcatccacctcgaactcgacgaggagacccgcaagctcgagatcgcc
atcgacggcctcgaatataccctcgcactgatcgacccggattcgatccgccaggagccc
gatctgcccgacctcgatctcgcctcggagatcgtcctcgaaggtcgagacgtcgaccgc
gccgtgacggcttcggacatggttagcgatcacgtcgcccttggggtcgacgagaccgac
gagctgttctacgtcgacgcggagggcgacaccgacgacgtccatctggaactcggtcgc
gaggacctcatcgacctgaccgccgggtccgcccggtcgctgttctcgctggactatctc
aaggacatgaacaaggcgatcccgaacgacgccgaggtcacgatggaactcggcgaggag
ttccccgtcaagatgcacttcgatatcgccgaggggcagggttcggtcacctacatgctc
gcgccgcgggtccagagcgactag
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integrated database retrieval system
