Halobacterium sp. BOL4-2: JRZ79_00485
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Entry
JRZ79_00485 CDS
T07284
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03030
DNA replication
habo03420
Nucleotide excision repair
habo03430
Mismatch repair
habo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JRZ79_00485
03420 Nucleotide excision repair
JRZ79_00485
03430 Mismatch repair
JRZ79_00485
03440 Homologous recombination
JRZ79_00485
03460 Fanconi anemia pathway
JRZ79_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habo03000
]
JRZ79_00485
03032 DNA replication proteins [BR:
habo03032
]
JRZ79_00485
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_00485
Transcription factors [BR:
habo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
JRZ79_00485
DNA replication proteins [BR:
habo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
JRZ79_00485
DNA repair and recombination proteins [BR:
habo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
JRZ79_00485
MMR (mismatch excision repair)
JRZ79_00485
DSBR (double strand breaks repair)
HR (homologous recombination)
JRZ79_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
SSB
POT1PC
DUF4131
DUF5666
Motif
Other DBs
NCBI-ProteinID:
QRY24912
UniProt:
A0A895AIG5
LinkDB
All DBs
Position
97331..98758
Genome browser
AA seq
475 aa
AA seq
DB search
MGAIEDVYADLDTDVSIEEFREAVESKVEQMGGLADEETAAMLIAHEIDDGEVNGVADID
SEMDEVKFIAKVTRVGDVRTFDREDADDDDDAAAEGRVVNVTVADETDDVRVSLWDEQAT
AAADDLAPGDVLRIKGRPTDGYNGLEVSADEVELDADEQIDVQIQDEYDAADLSLGVSDV
TLVGEVLDTEAVRTFDRDDGSEGRVSNLVVGDETGRVRVTLWDDQADTATDLDAGAVVEI
VDGYVREREGSLELHVGDTGAVTPVPDADVSFVPDTTSIDSLEQDDTADIAGVVRSVDPT
RTFDRDDGSEGQVRNVRLQDDTGDIRVALWGEKADLDVGPGDEVAALDVEIQDGWQDDIE
ASAGWQASVIPLSDSTQDDAAAGSDGPDRGLAAFGADSDDEPAATDDAADTQAPRSDTPV
EFTGVVVQAQDPLILDDGEETMSVTTDADVTLGQEVTVRGSLDDGRLHADDVTES
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgattgaggacgtgtacgctgacctcgacaccgacgtgtctatcgaggagttc
cgggaggccgtcgagtcgaaggtcgaacagatgggggggctcgccgacgaggagacggcg
gcgatgctcatcgcccacgagatcgacgacggcgaggtgaacggcgtcgcggacatcgac
tccgagatggacgaggtgaagttcatcgcgaaagtcacccgcgtgggtgacgtccgcacg
ttcgaccgcgaggacgccgacgacgacgacgatgcggccgccgaggggcgggtggtgaac
gtcacggtggccgacgaaacggacgacgtccgggtctcgctgtgggacgaacaggccacc
gcggccgccgacgacctcgcccccggggacgtgctccgcatcaaggggcggccgacggac
ggctacaacggcctggaggtcagcgccgacgaggtcgaactcgacgccgacgagcagatc
gacgtccagatccaggacgaatacgacgccgccgacctctcgttgggggtttcggacgtg
accctcgtcggggaggtcctggacaccgaggccgtccggacgttcgaccgtgacgacggc
agcgagggtcgtgtgtcgaatctcgtggtgggcgacgagaccggccgagtgcgagtgacc
ctgtgggacgaccaggccgacaccgcgacggatctcgacgccggggccgtcgtcgagatc
gtggacggatacgtccgcgagcgagagggcagcctcgaactccacgtcggggacaccggc
gcggtcacgccggtcccggacgccgacgtgtcgttcgttccggacaccacgtccatcgac
agcctcgaacaggacgacaccgcggacatcgcgggcgtcgttcggtcggtcgaccccacg
cgcacgttcgaccgcgacgacggcagcgagggccaggtacgcaacgtccgcctgcaggac
gacaccggcgacattcgggttgcgttgtggggcgaaaaggccgatctggacgtcggcccg
ggcgacgaagtggcggccctcgacgtggagatccaggacggctggcaggacgacatcgag
gcgtcggccggctggcaggcgtcggtgatcccgctgtcggacagcacccaggacgacgcc
gccgccggcagcgacggccccgaccgcgggctggcggcgttcggtgccgacagcgacgac
gagcccgccgccaccgacgacgcggccgacacacaggccccacgcagcgacacgcccgtg
gagttcaccggcgtcgtcgtgcaggcccaggacccgctgattctggacgacggcgaggag
acgatgagtgtcaccaccgacgccgacgtgactctcggccaggaggtcaccgtccgcggc
tcgctcgacgacggccggctccacgccgacgacgtcacggagtcgtga
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