Halobacterium sp. BOL4-2: JRZ79_01165
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Entry
JRZ79_01165 CDS
T07284
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRZ79_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_01165
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JRZ79_01165
Prokaryotic type
Archaeal type
TFB
JRZ79_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Zn_ribbon_RPB9
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QRY25039
LinkDB
All DBs
Position
complement(229413..230372)
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AA seq
319 aa
AA seq
DB search
MTDARMRSREQERTDETESESTDGCPECGGLVVNDEEHGESVCADCGLVVEEDGIDRGPE
WRAFDSKEKDEKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLSSNQRQKMQRLRKWNE
RFRTRDAKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALEDDLLPGRSIEGVATS
CVYAAARQAGVPRSLDEIADVSRVEKAEIARTYRYVVRELGLEVAPADPESYVPRFASDL
GLSDEASHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSEVADISE
VTIRNRYHELLEAEDTIPV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcacgaatgcgttcccgagagcaggagcgcacggacgagacggaatcggaa
tcgacggacggctgcccagagtgcggtggcctcgtggtcaacgacgaggagcacggcgag
tcggtgtgtgccgactgtgggctggtcgtcgaggaggacggcatcgaccgcggccccgag
tggcgcgcgttcgactccaaggagaaagacgagaaatcccgcgtcggtgccccgaccacg
aacacgatgcacgacaaggggctgtcgacgaacatcgactggcgggacaaggacgcctac
gggaacagtctctccagcaaccagcgccagaagatgcagcgcctgcgcaagtggaacgag
cgcttccgcacccgggacgccaaagagcgcaacctcaagcaggcgctcggcgagatcgac
cggatggcctccgcgctcgggctgccggacaacgtccgggagaccgcctcggtgatctac
cgccgcgcgcttgaggacgacctgctgcccgggcgctccatcgagggcgtcgccacgtcc
tgcgtgtacgccgccgcgcgccaggccggcgttccccgcagcctcgacgagatcgccgac
gtgtcccgcgtcgagaaggccgagatcgcgcgcacgtaccgctacgtcgtccgcgagctc
ggcctggaggtcgcgcccgccgaccccgagagctacgtgccgcggttcgcaagcgacctc
gggctcagcgacgaggcctcccatcgcgcccgcgagctcctgaagacggccaaagacaag
ggcgtccactccggcaagtcgccggtcgggctcgccgccgcagcggtgtacgccgcggcg
ctgctgacgaacgagaagacgacgcaggcgaaagtctcggaggtcgcggacatctccgag
gtcaccatccgcaaccgctaccacgagctgctggaggccgaagacaccattccggtgtag
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