Halobacterium sp. BOL4-2: JRZ79_01260
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Entry
JRZ79_01260 CDS
T07284
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
habo
Halobacterium sp. BOL4-2
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
habo03036
]
JRZ79_01260 (smc)
Chromosome and associated proteins [BR:
habo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JRZ79_01260 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Crescentin
AAA_13
DUF1664
ATG16
DUF724
Fez1
CENP-F_leu_zip
DUF4200
NPV_P10
TPR_MLP1_2
Fib_alpha
MscS_porin
Exonuc_VII_L
FPP
AAA_27
Filament
Knl1_RWD_C
FapA
Motif
Other DBs
NCBI-ProteinID:
QRY25057
UniProt:
A0A895AGC3
LinkDB
All DBs
Position
complement(249900..253472)
Genome browser
AA seq
1190 aa
AA seq
DB search
MYIEELVVENFKSFAGTTRIPFYEDFTTISGPNGSGKSNIIDAILFALGLARTTGMRAET
LTDLIYNPAHEGADGAAGPTEASVEVVLNNDAGVVSRSQVTTAAGSENVGSVDTITIKRR
VKRTDDSHYSYYYLNDRSVNLADIQELLAQAGIAPEGYNVVMQGDVTGIINMTAGERREI
IDEIAGVAEFDAKKRDAFEELDVVEERIGEAELKIDEKRDRLDRLADERETALEYQDLQE
EKQEYEGYAKAAELEERRADLSSTRADIDEQERELEGLTAELDERRDTVGRIEADLAALN
AEIERKGEDEQLAIKREIEEIKGEVSRLEDTVAACEDRVQDADAERREAVVEIDRKRERI
DALETDIREVKVQKASVTAEIQERRDELADIEAEIESVDTEFDELKAALADEKTALEDAK
RERNDHQREQDRLLDEAKRRSEELADAEADLEDARAELPEVDATLDELADELEKATRNRE
QIVDVVEDLKQEKRQRQEDLAAVEDELSAAQEEYARLEAQADQSGDSSYGKAVTTVLNDD
RDGVHGTVGQLGGVREQYATACETAAGGRLANVVVDDDGVGQRCIEYLKQRNAGRATFLP
ITEMQQRSLPSAPAMPGVVDFAYDLVDFDERYAPVFSYVLGSTLVVENMETARDLMGEFR
LVTLAGDLVEKSGAMTGGSRSGSRYSFSKSGKGQLERVAERIQGLEDDREDCRQEVREID
QRLDSARDRRQDATEQVRTIQADIEAAEADREAAVERIADLETRIEELQDEREAVDAEMQ
TVDAEIDAQQETIAAIEAEIESLEAELAESRIPELTAEKEDIEATVADLEGRVDELDGEL
NSLTLEKEYAEDAVEDLQADVADAESRKADEQARIEALNGDIEAKQAELAEKEAAVEDLE
AELADLKRDREERKADLSEAEDARDEQAAAVEDARHRLERLQAAAQTLSEEVAELDDAVG
EYDPAEIPDADVVAENVERLGARMEALEPVNMLAIDEYESVADTLDSLEAQRATLTEEAD
GIRERIARYDEQKKSTFMAAFEAINDHFQRIFSRLSAGTGGLELETPDDPFDGGLTMKAQ
PGDKPVQRLDAMSGGEKSLTALAFIFAIQRHTPAPFYALDEVDAFLDAVNADRVGELVDE
LAGDAQFVVVSHRSAMLDRSERAIGVTMQADNRSIVTGIDLSAQGAVTDD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtacatagaggaactcgtcgttgagaacttcaagagcttcgcagggaccacccgaatc
ccgttctacgaggacttcacgacgatcagtggtcccaacggctccgggaagtcgaacatc
atcgacgccatactgttcgcgcttgggttggcccgcaccaccgggatgcgcgccgaaacg
ctcactgatctcatctacaaccccgctcacgagggcgctgatggagccgcggggccgacg
gaggccagcgtcgaagtcgtgttgaacaacgacgcgggcgtggtctcccggtcgcaggtg
accaccgccgccggctccgagaacgtcggcagcgtggacaccatcacgatcaagcgccgc
gtcaagcgcaccgacgacagccactactcgtactactacctgaacgaccggtcggtgaac
ctcgcggacatccaagagctgctcgcgcaggccgggatcgccccggagggatacaacgtg
gtgatgcagggtgacgtcactggcatcatcaacatgaccgccggcgagcgccgcgagatc
atcgacgagatcgcgggtgtcgcggagttcgacgcgaagaagcgcgacgcgttcgaggag
ttggacgtcgtcgaggagcgcatcggggaggcggagctgaagatcgacgagaagcgcgac
cgcctcgaccgcctcgccgacgagcgcgagaccgccctcgaataccaggacctgcaggag
gaaaaacaggagtacgaggggtacgccaaggccgccgagttggaggagaggcgcgccgac
ctgtcgtcgacgcgggcggacatcgacgaacaggagcgcgagttggaggggctcaccgcc
gagttggacgagcgccgcgacaccgtgggccgcatcgaagcggatttggcggcgttgaac
gccgagatcgagcgcaagggtgaggacgaacagctcgcgatcaagcgcgagatcgaggag
atcaaaggcgaggtgtcgcggctcgaagacacggtcgcggcctgcgaggatcgcgtccag
gacgcggacgccgagcgccgagaggcggtcgtcgagatcgaccgcaaacgcgagcggatc
gacgcccttgagaccgacatcagggaggtgaaagtccagaaggcgtcggtgaccgcggag
atccaggagcgccgcgacgagctcgccgacatcgaagccgagatcgagtccgtggacacc
gagttcgacgagctgaaagccgcgctcgcggacgagaagaccgccctggaggacgccaaa
cgcgagcgcaacgaccaccagcgggagcaagaccgactgctggacgaggccaaacgccgc
agcgaggagctggccgacgccgaggccgacttggaggacgcccgggccgagctccccgag
gtggacgccacgctggacgagctcgcggacgaactggagaaggcaacgcggaaccgcgag
cagatcgtcgacgtggtcgaggacctcaaacaggagaaacgccagcgccaagaggacctc
gcggcggtcgaggacgagctgtcggcggcccaagaggagtacgcgcgcctggaggcgcag
gccgaccagtcgggagattcctcgtacgggaaggcggtgacgacggtgctgaacgacgac
cgggacggcgtgcacggcactgtcggccagttgggtggcgtgcgcgagcagtacgcgacc
gcctgcgagacggctgcgggcgggcggctggcgaacgtggtggtggacgacgacggcgtc
gggcagcgctgcatcgagtacctcaagcagcgcaacgccggccgcgcgacgttcctcccg
atcaccgagatgcagcagcggtcgctgccgagcgcgccggcgatgcccggcgtggtggac
ttcgcgtacgacctcgtggacttcgacgagcggtacgcgccggtgttctcgtacgtgttg
gggagtacgctggtcgtggagaacatggagaccgcacgcgacctgatgggcgagttccgg
ctcgtgacgctggcgggcgatctcgtcgagaaatccggtgcgatgaccggggggagtcgg
tcggggtcgcggtattcgttttcgaaatccgggaaggggcagctcgaacgggtcgccgag
cgcatccagggtctcgaagacgaccgcgaggactgccgccaggaggtccgcgagatcgac
cagcgcctggattcggcgcgggaccgccgccaggacgccaccgagcaggtgcggacgatc
caggccgacatcgaggccgccgaggccgaccgggaggccgccgtggagcgcatcgcggac
ctcgaaacgcgcatcgaggagctgcaggacgagcgcgaggccgtcgacgcggagatgcag
accgtcgacgcggagatcgacgcacagcaggagacgatcgcagccatcgaggccgagatc
gagtcgttggaggcggagttggcggagtcgaggatccccgagctcaccgccgaaaaggaa
gacatcgaggcgaccgtcgcggacctagagggtcgtgtcgacgagctcgatggcgagctg
aacagcctcacgctcgaaaaagagtacgccgaggacgccgtcgaggacctccaggctgac
gtggccgacgccgagagccggaaagccgacgagcaggcgcgaatcgaggcgttgaacggc
gacatcgaggccaagcaggcggagctcgctgagaaggaggcggcggttgaggacctcgaa
gccgagctggcggacctgaaacgcgaccgcgaggagcgcaaggccgacctcagtgaggcc
gaagacgcccgcgacgagcaggcggccgcggtcgaggacgcacgacaccgcctggagcgc
ctgcaggcggcagcgcagacgctcagcgaggaggtcgcggagctggacgacgccgtcggg
gagtacgatccggcggagattccggacgccgacgtggtcgccgagaacgtcgagcgcctc
ggcgcgcgcatggaggcgttggagccggtgaacatgctcgcgatcgacgagtacgagtcg
gtcgccgacaccctcgatagcctggaggcgcagcgagcgacgctcaccgaggaggccgac
gggattcgggagcgcatcgcgcgctacgacgagcagaagaagtcgacgttcatggcggcg
ttcgaggcgatcaacgaccacttccagcgcatcttctcgcggttgtcagccggcaccggt
gggctcgaactcgaaacccccgacgaccccttcgacggggggttgacgatgaaggcacag
cccggggacaaacccgtccagcggttggacgcgatgagcggcggcgagaagtcgctgacc
gcgctggcgttcattttcgccattcagcgccacacccccgcgccgttctacgcgctggat
gaggtggacgcgttcctcgacgcggtgaacgcggatcgcgtcggcgagctcgtggacgag
cttgcgggcgacgcgcagttcgtcgtggtcagccatcggtcggcgatgctcgaccgctcc
gagcgcgccatcggggtgacgatgcaggctgacaaccgcagcatcgtcaccggcatcgac
ctctcggcgcagggggcggtcacggatgactga
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