Halobacterium sp. BOL4-2: JRZ79_01285
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Entry
JRZ79_01285 CDS
T07284
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
habo
Halobacterium sp. BOL4-2
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habo03032
]
JRZ79_01285
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_01285
Enzymes [BR:
habo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JRZ79_01285
DNA replication proteins [BR:
habo03032
]
Prokaryotic type
DNA Topoisomerases
JRZ79_01285
DNA repair and recombination proteins [BR:
habo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JRZ79_01285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
HHH
DUF4332
Cdd1
Toprim_2
HHH_8
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QRY25062
UniProt:
A0A895AIV3
LinkDB
All DBs
Position
256495..258987
Genome browser
AA seq
830 aa
AA seq
DB search
MELIVTEKNNAARRIADILSEGGASTTQTAGVNVYEWGGRRCIGLSGHVVGVDFPPEYND
WRDVEPAELIHADVVKDPTQEDIVNALQRLAREADDVVIATDYDREGELIGKEAYELVRE
VNEQAPVNRVRFSSITDTEVRSAFADPDDIDFDLAAAGEARQIVDLMWGASLTRFLSLSA
GQMGEDFISVGRVQSPTLKLIVDKEREIEAFDPDDYWELFADLRKDQTTFEAQYFYEDPA
DGTEAERVWNEGDADAAFDALRQAGEAVVDSVSRRTRTDDPPAPFNTTQFIRAAGSLGYS
AGRAMSIAEDLYTAGYITYPRTDNTVYPDDLDERDLLEAFQQTVFGDDADSLLDQDRLSP
TSGDEETTDHPPIHPTTDFPDRNQLSEDEWAVYELVVRRFFATVAAPAEWAHLRVTADAD
GESLKANGKRLVESGYHAVYPYYDSSENHVPPVEEGDTLAITDARLDAKQTQPPRRYGQS
RLIETMESMDIGTKSTRHNTIEKLYDRGYIENDPPRPTTLAEAVVEAAEDYADVVVSEEM
TSQLEADMTAIADGETTLDDVTTESREMLDRVFDELTASRAEIGDHLRTSLKADKSLGPC
PECGDTLLLRQSRTGSHFVGCDGYPECQFTLPLPSTGDPLVMDAVCEDHDLHDVKMLAGR
NTFVHGCPLCAAEAADESEDRLIGPCPDCGEPHGGELAIKQLQSGSRLVGCDRYPDCEYS
LPLPRRGDIEVTETYCDEHDLPELVVHDGEDDDDPWELGCPICNYEEYQARQRQQGLEAL
DGVGPKTAAKLESAGVEDVGALADADPEGIADAVSGVSADTIREWQAQAD
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
gtggaactcatcgtcacagagaagaacaacgccgcgcggcgcatcgccgacatcctctcc
gagggaggggcgtcgacgacacagaccgcgggcgtgaacgtctacgagtggggtggccgg
cgctgcatcgggctgtccggccacgtcgtcggggttgatttcccgccggagtacaacgac
tggcgggacgtcgagcccgcggaactgatccacgccgacgtggtgaaagacccgacccag
gaggacatcgtgaacgcgctccagcggctcgctcgggaggccgacgacgtggtcatcgcg
accgactacgaccgcgagggcgagctcatcgggaaggaggcctacgagctcgtccgcgag
gtgaacgagcaggcaccggtcaaccgcgtgcggttctcctcgatcacggacaccgaggtg
cggtcggcgttcgcggaccccgatgacatcgacttcgacctcgcggccgccggcgaagcc
cgccagatcgtcgacctgatgtggggggcgtcgctgacccggttcctgtcgctgtcggcg
ggccagatgggcgaggacttcatctccgtgggccgggtgcagtcgcccacgctgaagctc
atcgtggacaaggaacgcgagatcgaggcgttcgaccccgacgactactgggagctgttc
gcggacctccggaaagaccagacgaccttcgaggcgcagtacttctacgaggaccccgcg
gacggcaccgaggccgagcgcgtctggaacgagggcgacgccgacgccgcgttcgacgcc
ctccggcaggccggcgaggcggtcgtcgactccgtctcccgccggactcgcaccgacgat
ccgcccgcgccgttcaataccacgcagttcatccgcgccgcgggctcgcttggctactcg
gcgggccgtgcgatgagcatcgccgaggacctctacaccgcgggctacatcacgtacccc
cgcaccgacaacaccgtctaccccgacgacctcgacgagcgcgacctgttggaagccttc
cagcagacggtgttcggcgacgacgccgattcgctgctcgaccaggaccgcctctcgccg
accagcggcgacgaggagaccaccgaccacccgccgatccatccgacaacggacttcccc
gaccgcaatcagctctccgaggacgaatgggcggtctacgaactcgtcgtgcggcggttc
ttcgcgacggtcgccgcgcccgccgagtgggcgcatctccgcgtcaccgcggacgccgac
ggcgagtccctgaaggccaacgggaaacgcctcgtcgagtcgggctaccacgcggtctac
ccgtactacgacagctccgagaaccacgtgccgcccgtcgaggagggcgacacgctcgcc
atcaccgacgcccgactggacgccaaacagacccagccaccgcgccggtacgggcagagt
cggctcatcgagacgatggagtcgatggacatcgggacgaagtccacgcggcacaacacc
atcgagaagctctacgaccgcggctacatcgagaacgaccccccgcggccgacgacgctc
gcggaggcggtcgtggaggccgccgaggactacgccgatgtcgtggtcagcgaggagatg
accagccaactggaggcggacatgaccgccatcgccgacggcgaaacgacactcgacgac
gtgaccacggagtcccgggagatgctcgaccgggtgttcgacgaactcaccgcctcccgg
gctgagatcggcgaccacctccgcacgtcactgaaggccgacaaatcactcggcccctgt
ccggagtgtggcgacacgctgttgctccggcagtcccgcaccggatcgcatttcgtgggc
tgcgatggctacccggagtgccagttcacactcccgctgccgtcgaccggcgacccactc
gtcatggacgccgtctgtgaggaccacgacctccacgacgtgaagatgctcgccggccgg
aacacgttcgtccacggctgcccgctgtgcgcggccgaggcggccgacgagtccgaggac
cgactcatcgggccgtgtccggactgcggcgaaccccacggcggcgaactcgccatcaag
cagctccagtcgggcagccggctcgtcggctgcgaccgctacccggactgcgagtactcg
ctgccgctgccccgacgcggcgacatcgaggtcacggagacgtactgcgacgagcacgac
ctccccgaactcgtcgtccacgacggcgaggacgacgacgacccctgggagctcggctgc
cccatctgcaactacgaggagtaccaggcccgccagcgccagcagggactcgaagcactg
gacggcgtcggtccgaaaaccgctgcaaaactcgaatcggccggggtcgaggacgtcggc
gcgctcgccgacgccgacccggaggggatcgccgacgcggtctcgggggtcagtgccgac
acgatccgagagtggcaagcgcaggcggactga
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integrated database retrieval system
