Halobacterium sp. BOL4-2: JRZ79_01375
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Entry
JRZ79_01375 CDS
T07284
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
JRZ79_01375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_01375
03019 Messenger RNA biogenesis [BR:
habo03019
]
JRZ79_01375
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
JRZ79_01375
RNA polymerase I system
JRZ79_01375
Messenger RNA biogenesis [BR:
habo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
JRZ79_01375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
DUF6093
Motif
Other DBs
NCBI-ProteinID:
QRY25079
UniProt:
A0A895AK49
LinkDB
All DBs
Position
complement(272997..273434)
Genome browser
AA seq
145 aa
AA seq
DB search
MSVFAVKTTASQEQTVASMIANREEDTIHAVLAPDALTSYVMVEAEDTAAIERTMDEIPH
ARSLVPGESGISEVEHFLSPKPDVEGIAENDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgttcgcagtgaagaccaccgccagccaggagcagaccgtcgcgagcatgatc
gcgaaccgcgaggaggacacgatccacgccgtgctcgcgcccgacgcgctgacgagttac
gtgatggtggaggccgaggacacggccgccatcgagcgcacgatggacgagatcccacac
gcccggagtctcgtcccgggtgagtcggggatctcggaggtcgagcatttcctctcgccg
aaaccggacgtcgagggcatcgccgagaacgacatcgtcgagctcatcgccggcccgttc
aaaggcgagaaggcccaggtgcagcgcatcgacgagggcaaagaccaggtgaccgtggag
ttgtacgaggcgacagtgccgatccccgtaaccgtccggggcgaccagatccgcgtcttg
gacagcgaagagcggtag
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