Halobacterium sp. BOL4-2: JRZ79_01935
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Entry
JRZ79_01935 CDS
T07284
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
habo
Halobacterium sp. BOL4-2
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_01935
DNA repair and recombination proteins [BR:
habo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JRZ79_01935
Archaeal homologous recombinant proteins
JRZ79_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_29
AAA_27
ABC_ATPase
Mod_r
ZnF_RZ-type
ABC_tran
CCDC39
MukB
Motif
Other DBs
NCBI-ProteinID:
QRY25188
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Position
377923..380574
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AA seq
883 aa
AA seq
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MRFTRLSLSNFKCYADAAVSLDPGVTVIHGLNGSGKSSLLDACFFALYGTTALDTTLAGA
VTIGAETAEIDLHFEHAGGDYHVHRRIRASGGRAQTAACVLETPTDRIDGVTDVEAHISG
LLRMDAEAFVNCAYVRQGEVNKLINAAPSTRQDMIDALLQLGKLEEYRQRAGDARLGVED
VKSNVEGQLDRLADQIADKEAADPHDRLASHNTALAEVTADIEHFETEREQARQTRDDAA
DVLERYGESRTALADVEETIADVREAVAEAERERETLADRVSDHRERASDLDDEAAALAA
DLGLDDPDAEDASAERDAVADQREAVAERVREVAPAVSRLTEQADSAADDAATLDERAET
LREEAAALDAEADDAAAKRDDAAARIEALDADIEAAMAAFDDAPVAFGAAEAFLDDATAE
RDELRERAATLRADRQSAADRVAEAEALLDEGKCPECGQPVEGAPHVERVTDDRERVAEL
DAELADVEDELDAVAQRVDRGESLVAAEDRVDDLEQQRERAVERRDEQADIADAKRDQAA
EKRDRAADLDAEAEDARADAAAKRDAADEKRETLAALNADQTALKERLDALADLVDRLEA
AADAREAAQRLAEKRAALAAQNEQRRDRLSELRERKRTLDSEFDADRIETARADKDRAED
YLEQVEPKLRALREDRDDLQAKIGAAENAIAELESLREEHERVQSRHQDLQAVHDEVTAL
ETMYGELRAELRQQNVSKLERLLNETFELVYQNDSYARIELSGEYELTVYQKDGEPLEPA
QLSGGERALFNLSLRTAVYRLLAEGIDGDAPLPPLILDEPTVFLDSGHVSQLVELVESMR
RLGVEQIVVVSHDDELVAAADDVVRVAKDATSNRSRVSTPEHI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcacgcgcctctccctgtcgaacttcaaatgctacgcggacgccgccgtctcc
ctggaccccggcgtgaccgtcatccacgggctgaacggcagcggcaagtccagcctgctc
gacgcctgctttttcgcgctgtacggcaccaccgccctcgacacgaccctcgctggcgcc
gtgacgatcggcgcggagacggccgagatcgacctccacttcgagcacgccggcggcgat
taccacgtccaccgccggatccgtgcgtccggcgggcgcgcccagaccgccgcctgtgtg
ctggagactccgaccgaccggatcgacggcgtcaccgacgtcgaagcccacatctcgggg
ctgttgcgcatggacgccgaggcgttcgtgaactgcgcgtacgtccgccagggcgaggtg
aacaagctcatcaacgccgccccgagcacgcgccaggacatgatcgacgcgctcctccag
ttggggaaactcgaggagtaccgccagcgcgccggcgacgcccgcctcggcgtcgaggac
gtcaagagcaacgtcgaggggcaactcgacaggctcgccgaccagatcgccgacaaggag
gccgccgacccccacgaccggctggcgagccacaacaccgcgctcgccgaggtcaccgcc
gacatcgagcatttcgagaccgaacgcgagcaggccaggcagacccgcgacgacgccgcg
gacgtcctggagcgctacggggagtcacgcacggcgctcgcggacgtcgaggagacgatc
gccgacgtccgcgaggccgtcgccgaggccgaacgcgaacgggagacgctcgccgaccgc
gtcagcgaccaccgcgagcgcgccagcgatctcgacgacgaggcagcggcgctcgcggcc
gatctcgggctcgacgatccggacgccgaagacgccagcgcggagcgcgacgccgttgcc
gaccagcgggaggcggtcgccgaacgggtgcgcgaggtcgcaccggctgtctcccggctc
accgagcaggccgacagcgccgccgacgacgccgccaccctcgacgagcgcgccgagacg
ctgcgcgaagaggccgcagccctcgacgccgaggccgacgacgcagcggcgaaacgcgac
gacgccgccgcccgcatcgaggcgttggacgccgacatcgaggcggcgatggcggctttc
gacgacgcgccggtcgcgttcggggccgccgaggcgttcctcgacgacgcgacggccgaa
cgcgacgaactgcgcgagcgggcggcgacgctccgcgccgaccggcagtccgctgccgac
cgcgtcgccgaggctgaggcgctgctcgacgaggggaaatgccccgaatgcggacagccg
gtcgagggggcaccccacgtcgagcgtgtcaccgacgaccgcgagcgcgtcgccgagctc
gacgccgagttggcggacgtcgaggacgaactcgacgcggtggcccagcgcgtcgaccgc
ggcgaatcactggtggccgccgaagaccgggtcgacgacctcgaacaacaacgcgagcgc
gccgtcgagcgccgcgacgagcaggccgacatcgcggacgcgaaacgcgaccaggccgcc
gaaaagcgcgaccgcgccgcggacctcgacgccgaggccgaggacgcccgtgcggacgcc
gcggccaagcgtgatgcggccgacgagaagcgcgagacgctggcggcgctgaacgccgac
cagaccgccctcaaggagcgactggacgcgcttgcggatctcgtcgaccgcctcgaagcg
gccgccgacgcccgcgaagccgcccagcggctggccgagaagcgcgcggcactggccgcc
cagaacgagcagcgccgggaccgcctctcggagctgcgcgagcgcaagcgcacgctggac
agtgagttcgatgcggaccgcatcgagacagcgcgcgccgacaaggaccgcgccgaggac
tacctcgaacaggtcgaaccgaaactccgggcgctgcgcgaggaccgcgacgacctccag
gcgaagatcggcgctgcggagaacgccatcgcggagctggagtcgctgcgcgaggagcac
gagcgcgtgcagtcacgccaccaggacctccaggcggtccacgacgaggtgaccgcgctc
gagacgatgtacggggagttgcgggcggagctgcgccaacagaacgtctcgaagctcgaa
cgcctcttgaacgagaccttcgagttggtctatcagaacgactcctacgcccgcatcgag
ctgtccggcgagtacgagctcaccgtctaccagaaggacggcgagcccctggagcccgcg
cagctctcggggggcgagcgcgcgctgttcaacctcagcctgcgcactgccgtctaccgg
ctgctggctgaggggatcgacggcgacgcccccctcccgccgctgatcctggacgaaccg
actgtgttcctcgactccgggcacgtctcgcagctcgtggaactggtggagtcgatgcga
cggctcggcgtcgagcagatcgtggtcgtgagccacgacgacgagctggtggcggccgct
gacgacgtggtgcgggtcgcgaaagacgccacgtcgaaccggtcccgtgtgtccaccccc
gaacacatatga
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