Halobacterium sp. BOL4-2: JRZ79_02910
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Entry
JRZ79_02910 CDS
T07284
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRZ79_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_02910
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
JRZ79_02910
Prokaryotic type
Archaeal type
TFE
JRZ79_02910
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GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DUF7129
DNA_ligase_ZBD
Zn_ribbon_8
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QRY25372
UniProt:
A0A895AJN1
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All DBs
Position
553596..554114
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AA seq
172 aa
AA seq
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MAFEDLLDDPVVQKYLHELVGPKGMPVAAAPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFQYENVPGNLREEMDRLLEALVDRREYELENEFYLCE
VCSIRFEFGEAMDLGFECPECGSAVEAMENTDLVDAMDDRIERLRSELAVEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacttacttgacgaccccgtggtacagaagtacctccacgagctggtc
ggaccgaaggggatgcccgtcgcggccgcgccgccggacggcgaggtgaccgacgaggag
ctcgccgagcgactcgggctggagctcaacgacgtgcggcgcgcgctgttcatcctctac
gagaacgacctcgcgacctaccgccgggtccgcgacgaggactcggggtggctcacgtat
ctctggacgttccagtacgagaacgtgccggggaacctccgcgaggagatggaccgactg
ctggaggcgctcgtcgaccgccgcgagtacgaactcgaaaacgagttctacctctgtgag
gtctgttcgatccgcttcgagttcggcgaggcgatggacctcgggttcgagtgtccggag
tgtggctccgccgtcgaagccatggagaacaccgacctcgttgacgcgatggacgaccgc
atcgagcgactgcgctcggaactcgccgtggaggcctaa
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