Halobacterium sp. BOL4-2: JRZ79_03330
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Entry
JRZ79_03330 CDS
T07284
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRZ79_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_03330
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JRZ79_03330
Prokaryotic type
Archaeal type
TFB
JRZ79_03330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
Zn_ribbon_RRN7
HTH_Tnp_ISL3
Cyclin_N
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QRY25448
LinkDB
All DBs
Position
complement(636760..637746)
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AA seq
328 aa
AA seq
DB search
MTNQRTTRDGSHGTESVPTQRSRESTDEDHGCPECNGDLVTDEDRGETTCGECGLVVEED
GIDHGPEWRAFNAQEQDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNTLSGRQRRKMQ
RLRKWNERFRTRNSKERNLKQALGEIERMASAFGLPDSVRETASVIYRRALGEDLLPGRS
IEGVATSALYAAARQANTPRSLDEVASVSRVDRGEIARTYRYVARELSLEVAPTDPASYV
PRFCSDLELSGDVERRARDLLAAAADAGITSGKSPVGLAAASVYAAALLTNERVTQNEVS
TVANVSEVTIRNRYHEILDAGGEPGVEA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccagcgcacaacacgagacgggagccacggcacggaatcagtacccacgcag
cgcagccgtgagtccaccgacgaagaccacgggtgcccggagtgcaacggcgacctggtg
accgacgaggatcgcggggagaccacctgcggcgagtgcggcctcgtggtcgaggaggac
ggcatcgaccacggccccgagtggcgcgcgttcaacgcccaagaacaggacgagaaatcc
cgcgtgggcgccccgaccacgaacatgatgcacgacaaggggttgtccacgaacatcggc
tggcaggacaaagacgcctacggcaacaccctgtcggggcgccagcggcggaaaatgcag
cgcctgcgcaagtggaacgagcgcttccgcacccgcaacagcaaggaacgcaacctcaag
caggcgctgggtgagatcgagcgcatggcctccgcgttcgggctgccggacagcgtccgg
gagaccgcctcggtgatctaccgccgcgcgctcggcgaggacctgctgcccgggcgctcc
atcgagggcgtcgccaccagcgcactgtacgccgccgcgaggcaggcaaacacgccccgc
agcctcgacgaggtcgcaagcgtcagccgcgtcgaccgcggcgaaatcgcgcgcacgtac
cgctacgtggcccgcgagctcagcctcgaagtcgcaccgacggatcccgcgagttacgtt
ccccggttttgctctgacctggagctgtccggcgacgtcgaacggcgcgcccgagacctg
ctggccgccgccgccgacgccggcatcacgtccgggaagtcgccggtcggcctcgccgcg
gcgtccgtgtacgcggcggcgctgctcacgaacgagcgcgtcacgcaaaacgaggtcagc
accgtcgcgaacgtcagcgaggtcaccatccgcaaccgctaccacgagatcctggacgcg
ggcggtgaacccggcgtggaagcgtaa
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