KEGG   Halobacterium sp. BOL4-2: JRZ79_04885
Entry
JRZ79_04885       CDS       T07284                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
habo  Halobacterium sp. BOL4-2
Brite
KEGG Orthology (KO) [BR:habo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:habo03400]
    JRZ79_04885
Enzymes [BR:habo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JRZ79_04885
    5.6.2.6  RNA 3'-5' helicase
     JRZ79_04885
DNA repair and recombination proteins [BR:habo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JRZ79_04885
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 Zn_ribbon_PaaD AAA_19 Cas3-like_C_2 HypA DmmA-like_C
Other DBs
NCBI-ProteinID: QRY25742
UniProt: A0A895AKL9
LinkDB
Position
complement(908118..910958)
AA seq 946 aa
MSETGGGRMDAFTHLGSEVRDALSERGFTTPTEPQRRAVPALADGRNGLVVAPTGTGKTE
TAMLPVFDALVSDGGPPDGFGALYVTPLRALNRDMRERLDWWGETLGLEVDVRHGDTTDY
QRRQQATDPPDVLVTTPETLQAMLTGSTLRDGLADVEHVVVDEVHELAGAKRGAQLAIGL
ERLVEVAGRVQRIGLSATVGDPHEIGAFLTGGRGCEIIEVDVTSNVSFEVREPAVTDADE
RLASELLTTPAMASHVRAIREIVDRHDSVLIFVNTRQTAEALGSRFKELDANIGVHHGSL
SKDARIDVEDRFKSGDLDGLLCTSSMELGIDVGGIDHVVQYNSPREVKRLLQRVGRAGHS
RDAVSEGTVITGSTDDTLEALAVADRANEGAVEDTQVHHGSLDTVANQIVGVVMDVGETE
AWHAYNIITRAYPFKELTEETFRAVAMELHRNRVVYVDEDDDTISTSGGTWQYYYANLSM
IPDEETYEVYDMAGGRQVGTLDERFVVNFAEPGATFVQRGEMWRITNIDEDDQQVEVSPI
EDPAGEVPSWTGQEIPVPYAVAQAVGGMRATGGRQLGTGTPKDAVARDVAARYPTTHRTA
GSALDRMARHVTEQDAPVPSAERIVVEQAGSTVVVNACFGHEVNETLGRLVSALLGQQTG
SSVGLDAGPYRIELEVPSRVSATDVVAVLRDTDPDHVAGLLELSLKQSETLKFTLAQVAA
KFGALKRWKGRDGVGLSRLLGALEDTPVYEEAIREVFHTTLDVARASDVLARVQSGELGV
EIVGKRTAVGAGGRSAGTELLTPEHADASVVQTIKDRIQDDRVKLFCVHCADWSHETMVR
RVTDQPECPRCGSTRIAALSPWADEVITAVRADDKDDEQDDRTQRAYRNASIVQSHGKRA
VIALSARGVGPRNAARVINRHRETEAEFYRDILEREREYARTKAFW
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgtcggagaccggtggtggccggatggacgcgttcactcacctcggcagcgaggtccgg
gacgcgctctccgagcgcgggttcaccacgccgacggagccccaacgtcgcgcggtgccc
gcgctcgcggacgggcgaaacgggttggtcgtcgccccgacggggaccgggaagacggag
acggcgatgctgcccgtcttcgacgcgctcgtctcagacggcgggccgcccgacgggttc
ggtgcgctgtacgtgacgccgctgcgggcgctgaaccgggacatgcgcgagcgcctggac
tggtggggggagacgctgggcctggaagtcgacgtgcgacacggggacacgacggactac
cagcgccgacagcaggccaccgatccgccggacgtgctggtgaccacgccggagaccctg
caggcgatgctgaccgggtcgacgctccgggatgggcttgcagacgtcgagcacgtcgtc
gtcgacgaggtccacgagctggcgggcgcgaagcgcggtgcgcagctggcgatcgggctc
gaacgcctcgtggaggtggccgggcgcgtccagcggatcgggctgtcggcgacggtcggg
gatccccacgagatcggggcgtttctcaccggcggccgggggtgtgagatcatcgaagtc
gacgtgacgtcgaacgtgtcgttcgaggtgcgggagccggccgtcacggacgccgacgag
cggttggcgagcgaactgctgaccacgccggcgatggccagccacgtccgcgcgatccgg
gagatcgtcgaccgccacgactcggtgttgatcttcgtgaacacccgccagaccgcggag
gcgctggggtcgcggttcaaggagctggacgcgaacatcggcgtgcaccacggctcgctg
tcgaaagacgcccgcatcgacgtcgaggatcgcttcaagtccggcgacctcgacggcctg
ctgtgcacgtcctcgatggagctcgggatcgacgtgggcgggatcgaccacgtggtgcag
tacaactcgccccgggaggtcaagcgcctgctccaacgcgtgggccgggcaggccacagc
cgggacgcggtcagcgagggcaccgtcatcacgggcagcaccgacgacaccctggaggcg
ctggcggtcgcagaccgggccaacgagggcgccgtcgaggacacccaggttcatcacggc
agcctcgacactgttgcgaaccagatcgtcggcgtcgtgatggacgtcggggagaccgaa
gcctggcacgcgtacaacatcatcacgcgcgcgtatccgttcaaggagctcaccgaggag
acgttccgggcggtggcgatggagctccaccggaaccgcgtggtgtacgtcgatgaggac
gacgacaccatctcgacgtccggggggacgtggcagtactactacgcgaacctctcgatg
atccccgacgaggagacctacgaggtgtacgacatggccggcggccggcaggtcggcacg
ctcgacgagcggttcgtggtgaacttcgcggagccgggcgcgacgttcgtgcagcgcggc
gagatgtggcgcatcacgaacatcgacgaggacgaccagcaggtggaggtctcgcccatc
gaggacccagcgggcgaggtgccgtcctggacgggccaagagatcccggtgccgtacgcg
gtcgcgcaggcagtcggtgggatgcgggcgacgggcggccggcagctcggcaccgggacg
cccaaggatgcggtggcgagagacgtggcggcgaggtatccgaccacccaccggaccgcc
ggcagcgcgctcgaccggatggcccgccacgtgaccgagcaggacgcgcccgtgccgagc
gccgagcggatcgtcgtcgagcaggccggctcgacggtggtggtgaacgcgtgcttcggg
cacgaggtcaacgagacgttggggcggctggtgtcggcgctgctcggtcagcagacgggg
tcgtcggtggggctggacgcgggcccgtaccgcatcgagttggaggtcccgagccgggtg
agcgccacggacgtcgtggcggtgttgcgcgacaccgaccccgatcacgtggccgggttg
ctcgaactcagcctgaaacagtcagagacgctgaagttcacgctcgcacaggtcgccgcg
aagttcggcgcgctcaagcgctggaaggggcgggacggcgtggggttgtcccggctgctg
ggggcgcttgaagatacgcccgtctacgaggaggcgatccgggaggtgttccacaccacg
ctggacgtggcgcgcgccagcgacgtgctcgcgcgcgtgcagtccggcgagctcggcgtc
gagatcgtgggcaagcgcacggccgtgggggccggcggccggtcggcgggaacggagttg
ctcacgccggagcacgccgacgccagcgtcgtgcagacgatcaaagaccgcatccaggac
gaccgcgtgaagctgttctgcgtgcactgcgccgattggagccacgagacgatggtccgt
cgggtcaccgaccagccggagtgcccccggtgtgggtcaacgcggatcgcggcgctgtcg
ccgtgggcggatgaggtgataacggcggtgcgtgccgacgacaaggacgacgagcaggac
gaccggacacagcgcgcgtaccggaacgccagcatcgtgcagagccacgggaagcgggcc
gtgatcgcgttgtcggcgcgcggcgtcggcccccggaacgccgcccgcgtcatcaaccgc
caccgggagacggaggcggagttctaccgggacatccttgagcgcgagcgcgagtacgcg
cgcaccaaggcgttctggtag

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