Halobacterium sp. BOL4-2: JRZ79_05295
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Entry
JRZ79_05295 CDS
T07284
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03030
DNA replication
habo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JRZ79_05295 (fen)
03410 Base excision repair
JRZ79_05295 (fen)
03450 Non-homologous end-joining
JRZ79_05295 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
habo03032
]
JRZ79_05295 (fen)
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_05295 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
habo04147
]
JRZ79_05295 (fen)
DNA replication proteins [BR:
habo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
JRZ79_05295 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
JRZ79_05295 (fen)
DNA repair and recombination proteins [BR:
habo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
JRZ79_05295 (fen)
Exosome [BR:
habo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JRZ79_05295 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
SPEF2_D5
Motif
Other DBs
NCBI-ProteinID:
QRY25817
LinkDB
All DBs
Position
complement(981367..982350)
Genome browser
AA seq
327 aa
AA seq
DB search
MGNADLRQLAAIEETPFADLEGSVVAVDAHNWLYKYLTTTVQWTGADVYTTSDGTEVANL
VGAVQGLPKFFEHGLTPVFVWDGGVTELKDDEIADRREQRERYEEQLDDAREAGDAAEAA
RLDARTQRLTPTIHETTRELFDLLDIPQVEAPAEGEAQAAYMTRTDDAVDYAGSDDYDCL
LLGSPVTLRQLTSSGHPELMDFDATLAEHDLTWEQLVDVGILCGTDFNPGIDGFGPTTAL
DAIGEHGDLWDVLAAEGEHVAHGDRIRELFLNPDVTDDYVIDPDVSPAIDAARAFVTDEW
EVDADAVARGFERIDAAAAQTGLDRWT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgcggacctccggcagctcgcggccatcgaggagactcccttcgcggacctc
gaagggagtgtggtggccgtcgacgcccacaactggctgtacaagtacctcaccacgacc
gtccagtggaccggcgcggacgtctacaccaccagcgacggcaccgaagtggcgaacctc
gtcggcgcggtgcagggcctgccgaagttcttcgaacacggcctcacgcccgtgttcgtc
tgggatggcggggtcaccgagctcaaagacgacgagatcgccgaccgccgcgagcaacgc
gagcgctacgaggaacagctcgacgacgcccgcgaggcgggcgacgccgccgaggcggcg
cgcctggacgcgcgcacgcagcgactcacgcccaccatccacgagaccacccgggagctg
ttcgacctgttggacatcccgcaagtcgaagcccccgcggagggcgaagcacaggccgca
tacatgacgcggacggacgacgccgtcgactacgcgggcagcgacgactacgactgcctg
ctgcttgggtcgccggtgacgctgcgccagctcacgagctccggccacccggagctgatg
gacttcgacgcgacgctcgccgaacacgacctgacgtgggagcaactcgtcgacgtcggg
atcctctgtgggacggatttcaaccccgggatcgacgggttcggaccgacaacggccctg
gacgcgatcggcgagcacggcgacctctgggacgtgctggcggccgaaggcgagcacgtc
gcccacggcgaccgcatccgggagctgttcttgaaccccgacgtgaccgacgactacgtg
atcgaccccgacgtgtcaccggccatcgacgcggcccgcgcgttcgtcaccgacgagtgg
gaggtcgacgccgacgcggtcgcccgggggttcgagcgcatcgacgccgcggccgcacag
accggcctcgaccggtggacgtga
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integrated database retrieval system
