Halobacterium sp. BOL4-2: JRZ79_05645
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Entry
JRZ79_05645 CDS
T07284
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
habo
Halobacterium sp. BOL4-2
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habo03000
]
JRZ79_05645
Transcription factors [BR:
habo03000
]
Prokaryotic type
Helix-turn-helix
Other families
JRZ79_05645
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GFIT
Motif
Pfam:
TrmB_EBD_N
TrmB-TrmBL1_EBD_C
TrmB
MarR_2
HTH_20
HTH_IclR
HTH_5
HTH_Cmi2_C
HTH_24
HVO_A0261_N
PF0610-like_N
HTH_CodY
HTH_9
Rrf2
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
QRY23903
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Position
1041390..1042448
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AA seq
352 aa
AA seq
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MSDEDLRGTVEQVGRGFNLGEYEVEAYLTVLRHGELTASDIADRTDIPQPRVYDTVRSLG
DRGLVELRESRPMKIVALSPEDAFAGLQEDFQEMVGALEAEYTQPARNTEAVSLVKSRST
IVRYFGDVIAEADFELVCSLTPSLLERFADDLAAAVDRGVSVDVVVSPARNAPDPDAFDY
AAATTAARGRRGITTPVIAVADGRYSVYATQDAVRDDSDRYGVIFDQSALGFLVSGFFDT
VLWSTATESLYDPATELSLPRTYAAIRRCVRDLQSVDESVYATVTGRDVLTGADRRIQGR
IVETRFEESGEVATIIVYTENGDRVEVGGRVAALEDVEAHEIAVARDAPPAL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaggacctccgcggcaccgtcgaacaggtcggcagaggcttcaacctcggc
gaatacgaggtcgaagcctacctcacggtgttgcgccacggcgaactcaccgccagcgac
atcgccgaccgcacggacatcccccagccacgcgtctacgacaccgttcggagcctcggc
gaccgcgggctcgtcgagttgcgcgagtcacgccccatgaagatcgtcgcgctcagcccc
gaggacgcgttcgccggactccaggaggacttccaggagatggtcggcgcgctcgaagcc
gagtacacccagcccgcgcgcaacaccgaagccgtctcgctggtgaaatcccgctcgacg
atcgtgcggtacttcggcgacgtgatcgcggaggccgacttcgagttggtgtgctcgctc
acgccgagcctgctggagcggtttgccgacgacctcgcggccgccgtcgaccgcggcgtc
agcgtcgacgtggtggtcagcccggcacggaacgctccggatcccgacgctttcgactac
gccgccgccaccaccgccgcgcgcggccgccgcggcatcaccacgcccgtcatcgcggtc
gccgacggccggtattcggtgtacgccacccaggacgccgtccgcgacgactccgaccgc
tacggcgtgatcttcgatcagtccgcgctggggttcctggtgtcgggcttcttcgacacg
gtgttgtggtcgacggccaccgagtcgctgtacgaccccgccacggagctgtcgttgccc
cggacgtacgccgcgatccggcgctgcgtccgggacctccagtccgtcgacgaatccgtc
tacgccaccgtcaccggccgggacgtgctcacgggggccgaccgcaggatccaggggcgg
atcgtcgaaaccaggttcgaggaatccggggaggtcgcgaccatcatcgtctacaccgag
aacggcgaccgcgtcgaggtcggcggccgggtggccgccctcgaagacgtcgaagcccac
gagatcgcggtcgcccgggacgccccgccggcgctctga
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