Halobacterium sp. BOL4-2: JRZ79_07975
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Entry
JRZ79_07975 CDS
T07284
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
JRZ79_07975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_07975
03019 Messenger RNA biogenesis [BR:
habo03019
]
JRZ79_07975
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
JRZ79_07975
RNA polymerase I system
JRZ79_07975
Messenger RNA biogenesis [BR:
habo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
JRZ79_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
DUF7575
HypA
Zn_ribbon_15
Zn_ribbon_19
Zn_Ribbon_TF
DZR_2
Zn_ribbon_NOB1
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QRY24343
UniProt:
A0A895AEC4
LinkDB
All DBs
Position
complement(1490251..1490448)
Genome browser
AA seq
65 aa
AA seq
DB search
MASNRLACHDCHRIVEPDEEMCPYCSSNSLTEDWAGYVVITHPDTSEIADKMEVHEAGEF
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatcgcctcgcgtgccacgactgccaccggatcgtcgagcccgacgaggag
atgtgtccgtactgctcgtcgaacagtctcaccgaggactgggcgggctacgtggtgatc
acccaccccgacacctcggagatcgcggacaagatggaagtgcatgaggccggcgagttc
gcgctgaaggttcggtga
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integrated database retrieval system
