Halobacterium sp. BOL4-2: JRZ79_08645
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Entry
JRZ79_08645 CDS
T07284
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
habo
Halobacterium sp. BOL4-2
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
habo03016
]
JRZ79_08645 (endA)
Enzymes [BR:
habo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
JRZ79_08645 (endA)
Transfer RNA biogenesis [BR:
habo03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
JRZ79_08645 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
QRY24468
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Position
complement(1618797..1619828)
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AA seq
343 aa
AA seq
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MDGDLRGDTVHIGGDARQRFHDARGYGYPLGGNDIAVSLVEAAHLLFRGDLDSVDGMGFR
AFLTDREAGFAARFLVYVDLRDRGFYLVPDRDPWWRDPGDGDFVVFPRGNTRRDGVVKHR
VRVVDERTTLPVDGLSESVLAVVDEESEITYLDIAPETPTGETTLDRPTDVPGVLLDDRV
LVWEPPQRLHNAGFYGQPLGGRAADHDALQLSLVEAAYLIDAGVLTLTDATIDDVRARGR
LGEGEHFDCRLAVYRALRDAGAVPKTGFKFGADFRVYSAVSSVDDLGHSELLVRVITDTH
VFSPGDLSLDVRLAHGVRKRMVFAATDDTDDTIRWLSVSRLTP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgatctgcgcggggatacagtgcatatcggtggcgacgcccgccagcgattc
cacgacgcacgcgggtacggctacccgctgggcggcaacgacatcgcggtgtcgctcgtg
gaggccgcccacctcctgttccgtggcgacctcgattccgtcgacggcatggggtttcgg
gcgtttctcacggaccgcgaggcggggttcgccgcccggtttctggtctacgtcgacctc
cgggatcgggggttctacctggtgccggaccgcgacccgtggtggcgcgaccccggcgac
ggcgatttcgtggtgttcccgcgcgggaacacgcgccgcgacggcgtcgtgaaacaccgg
gtgcgcgtggtcgacgagcgcacgaccctccccgtcgacgggctctcggagtcggtgctg
gcggtcgtcgacgaggaaagcgagatcacctacctcgacatcgcccccgaaacccccacc
ggggagacgaccctcgaccgccccaccgatgtcccgggggtgttgttggacgaccgcgtg
ctcgtctgggagccgccacagcgcctgcacaacgccggcttctacggccagcccctcggc
gggcgcgccgccgaccacgacgccctccagttgtcgctcgtggaggcggcgtacctcatc
gacgccggcgtgttgacgctcaccgacgccaccatcgacgacgttcgtgcccgcgggcgg
ctcggtgagggcgagcatttcgactgccggctggccgtctatcgcgcgctccgtgacgcc
ggcgcggtcccgaaaaccgggttcaagttcggcgccgacttccgcgtgtactcggcggtg
tcgtcggtcgacgacctcgggcactcggagctgctggtgcgcgtgatcaccgacacccac
gtgttctccccgggggacctctcgctcgacgtgcgactggcccacggcgtccgcaagcga
atggtttttgcggctaccgacgacacagacgacacgattcgctggctttcggtgagtcga
ttgacgccatga
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