Halobacterium sp. BOL4-2: JRZ79_08775
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Entry
JRZ79_08775 CDS
T07284
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRZ79_08775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habo03000
]
JRZ79_08775
03021 Transcription machinery [BR:
habo03021
]
JRZ79_08775
Transcription factors [BR:
habo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
JRZ79_08775
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
JRZ79_08775
RNA polymerase III system
TFIIIB
JRZ79_08775
RNA polymerase I system
SL1/TIF-1B
JRZ79_08775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
QRY24493
LinkDB
All DBs
Position
1649813..1650373
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHESLRIVFDKLRELSIKVEDDPEIVVQNIVTSADLGRQLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPKDAEHAVDKITSRLE
ELGLLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccaaggaaaccatcaacattgaaaacgtggtcgcctccaccggcatcggg
caggagctcgatctccagagcgtggcgatggacctcgagggcgctgactacgaccccgag
cagttccccggcctggtctaccgcacgcaggacccgaaaagcgccgcactcatcttccgc
tcgggcaagatcgtctgcacgggcgcgaaatcaaccgacgacgtacacgagagcctccgc
atcgtcttcgacaagctccgcgagctctcgatcaaggtcgaagacgaccccgagatcgtc
gtccagaacatcgtcacgtccgctgacctcggccgccagctgaacctcaacgccatcgcc
atcgggctgggcctcgaaaacatcgagtacgagcccgagcagttccccgggctcgtctac
cgtctcgacgaccccgaggtcgtggcgctgctgttcggctccgggaagctcgtcatcacc
ggcggcaaagagccaaaggacgccgagcacgccgtcgacaagatcacgtcccggctcgag
gagctggggctcctcgactag
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