Halobacterium sp. BOL4-2: JRZ79_09390
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Entry
JRZ79_09390 CDS
T07284
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JRZ79_09390 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_09390 (uvrB)
DNA repair and recombination proteins [BR:
habo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JRZ79_09390 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JRZ79_09390 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
DUF87
HEM4
Motif
Other DBs
NCBI-ProteinID:
QRY24610
LinkDB
All DBs
Position
complement(1770366..1772435)
Genome browser
AA seq
689 aa
AA seq
DB search
MSDASGPLQPDRPEADVPFRVEAPFDPAGDQPDAIAELVAGYEQGAQQQTLLGVTGSGKT
NTVSWVVEELQQPTLVIAHNKTLAAQLYEEFRSLFPDNAVEYFVSYYNYYQPEAYVEQTD
KYIEKDASINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPRNYEEMSLRVERGQS
IGRDQLLAKLVDLNYDRNDVDFTQGTFRVRGDTVEVYPMYGRYPVRVEFWGDEIDRMAKL
DPLEGTVESEEPAVLFHPAEHYSVPDAEMEQAIKRIRTDMHERVRHFERTGDMVAAQRIE
ERTTFDLEMMAEAGYCSGIENYSVYLSDREVGDAPYTLLDYFPDDFLTVIDESHRTVPQI
KGQYEGDKSRKDSLVDNGFRLPTAYDNRPLTFAEFADKTDRTLYVSATPGDHERAQSANV
VEQIVRPTHLVDPDISIADATGQVEDLMDRIDERVARDERVLVTTLTKRMAEDLTEYLEE
AGVAVEYMHDETDTLERHELVRGLRLGEYDVLVGINLLREGLDIPEVSLVAILDADQQGF
LRSETSLVQTMGRAARNVNGEVVLYADETTDAMQAAIDETQRRRRIQRAFNEDHGTTPTT
IEKAVGDMNLPGAETDTADVAGDAPSDEQEAALLVEDLEARMEDAASNLEFELAADIRDR
MRELREAFDLDGGDAPEDPGGVAPETEDW
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgccagcggccccctccagccggaccgacccgaggccgacgtgccgttccgc
gtcgaagcgcccttcgacccggcgggcgaccagcccgacgccatcgcggaactggtcgcg
ggctacgagcagggcgcacaacagcagacgctgctcggcgtgaccggctccgggaagacc
aacaccgtctcgtgggtcgtcgaggaactccagcagcccacgctggtcatcgcgcacaac
aagacgcttgccgcacagctctacgaggagttccggtcgctgttccccgacaacgccgtg
gagtatttcgtctcctactacaactactaccagcccgaggcgtacgtcgagcagaccgac
aagtacatcgagaaagacgcctcgatcaacgacgagatcgaccggctgcgccactccgcg
acgcggtcgctgctgacccgcgacgacgtcatcgtcgtggcgtcggtgtccgcgatctac
gggctcggggacccgcgtaactacgaggagatgagcctgcgcgtcgagcgcgggcagtcc
atcggccgcgaccagctgctcgcgaagctcgtggacctgaactacgaccgcaacgacgtg
gatttcacgcagggcaccttccgagtccggggcgacaccgtcgaagtgtacccgatgtac
ggccgctaccccgtgcgggtggagttctggggcgacgagatcgaccgcatggcgaaactc
gaccccctggagggcaccgtcgagagcgaggagccggcggtcctgttccaccccgccgag
cactactcggtgcccgacgccgagatggagcaggcgatcaagcggattcggacggacatg
cacgagcgcgtccggcatttcgagcgcaccggggacatggtggccgcccagcgcatcgag
gagcgcaccaccttcgacctggagatgatggcggaggccggctactgttcgggcatcgag
aactactcggtgtacctctcggaccgcgaggtcggggacgccccctacacgctgctcgat
tacttccccgacgacttcctcaccgtcatcgacgagtcccaccgcaccgtcccccagatc
aagggccagtacgagggcgacaaatcacgcaaggacagcctcgtggacaacggcttccgg
ctgccgacggcctacgacaaccgcccgctgaccttcgcggagttcgcggacaaaaccgac
cgcacgctgtacgtctccgcgacgccgggcgaccacgagcgcgcgcagtccgcgaacgtc
gtcgagcagatcgtgcgccccacacacctcgtcgaccccgacatctcgatcgccgacgcc
accgggcaggtcgaggacctcatggaccgcatcgacgagcgcgtcgcccgcgacgagcgc
gtgctcgttacgacgctcacgaaacgcatggccgaggatctcaccgaatacctcgaagaa
gccggggtggccgtcgagtacatgcacgacgagacggacaccctggagcgccacgaactc
gtgcgcgggctcagactgggcgagtacgacgtgctcgtgggcatcaacctgctgcgggag
gggttggacatcccggaggtcagcctggtggcgatcctcgacgccgaccagcaggggttc
ctgcgctcggagaccagcctcgtgcagacgatggggcgcgccgcccggaacgtcaacggc
gaggtcgtcctgtacgccgacgagaccacggacgcgatgcaggccgccatcgacgaaacc
cagcgccgccgccgcatccagcgggcgttcaacgaggaccacggcaccacaccgaccacc
atcgagaaggccgtcggcgacatgaacctccccggtgctgagaccgacaccgcagacgtc
gccggggacgcccccagcgacgagcaggaggccgccctgctcgtcgaggacctcgaagca
cgcatggaagacgccgcgagcaacctcgagttcgaactcgccgccgacatccgcgaccgc
atgcgggagctccgcgaggcgttcgacctcgacggcggcgacgcccccgaggaccccggc
ggcgtcgcacccgaaactgaggactggtga
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integrated database retrieval system
