Halobacterium sp. BOL4-2: JRZ79_10235
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Entry
JRZ79_10235 CDS
T07284
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03420
Nucleotide excision repair
habo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JRZ79_10235
03430 Mismatch repair
JRZ79_10235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_10235
Enzymes [BR:
habo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JRZ79_10235
DNA repair and recombination proteins [BR:
habo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JRZ79_10235
MMR (mismatch excision repair)
Other MMR factors
JRZ79_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Herpes_ori_bp
DEAD
AAA_22
AAA_11
AAA_12
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
QRY24763
UniProt:
A0A895AFF1
LinkDB
All DBs
Position
complement(1927269..1929098)
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AA seq
609 aa
AA seq
DB search
MTDSEPEVTRLFGGPGSGKTTALLDHVEEILSEDDVSVRDILVVSYTRAAAAEVRERLAE
RLDMNPRSLRGNVATMHAKAYELLGLSRGDVVGESDKEAFCEEYGISFEDEYASGSRRTA
RSTTLGNKVIATSQWLQRTSRDVSEWYDVPFRWDDEEVRLPPEIDENAQVGNKYTPTWPS
SDERHDIPEAIRAWRTYKGENELVGFADMLERVEQRSLLPNVEYLVIDEFQDITSLQYDV
YEEWRPHMDRVLIAGDDDQVVYAWQGADPRLLLDTTVTDDQVLPNSYRLPSQVLEIVQQE
ISHIDTRQEKDLKPRKEGGSVEAIDSPSMLDLVRNVRRTVEATDDDTVMILFRARYQLFD
FVDEFIGDGIPFRALTDQRMWTDRLQQYINAVEALETDDDVNGLEARRLMDMLQDSAFGT
NDRSDLREAIDEAQGESTDLTELTFPAEFIRDYVPFVPGPSAAADMLRKVTRYQRRSIDA
YFEGDYRGMDPDRVRVGTIHSAKGREADHVFLATDLTEKVVEQMAATADPETVPDDVEFT
SKTSPVPILTDNERRVFYVGMSRARERLVLLQDLVGGAPTLPIDVLLYGERTGQTLADAL
DADTPVQIP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcggagccggaagtcacgcggctgttcggtggtccggggagcgggaaaacg
accgcgctcctcgaccacgtcgaggaaatcctcagcgaggacgacgtctcggttcgagac
atcctcgtcgtgtcgtacacgcgcgctgcagccgccgaggtccgggaacgactcgccgag
cgactcgacatgaacccgcgatccctgcgggggaacgtcgccacgatgcacgccaaagcc
tacgaactcctcgggttgtcccgtggggacgtcgtcggcgagagcgacaaggaggcgttc
tgtgaggagtacggcatctccttcgaggacgagtacgcctccgggtcgcgccggacggcg
cgctcgacgacgctggggaacaaggtcatcgccacctcacagtggctccagcgaaccagc
cgggacgtctcggagtggtacgacgttcccttccgctgggacgacgaggaggtccgcctc
cccccggagatcgacgagaacgcacaggtcgggaacaagtacacgccgacgtggccgtcc
agcgacgaacgccacgacatccccgaggcgatccgggcgtggcggacgtacaaaggcgag
aacgaactcgtcgggttcgcggacatgctcgaacgcgtcgagcagcgctcgctgctgccg
aacgtcgagtacctcgtcatcgacgagttccaggacatcacgagcctccagtacgacgtc
tacgaggagtggcggccccacatggatcgcgtcctcatcgcgggcgacgacgaccaggtg
gtgtacgcctggcagggcgccgacccccgcctgctgctcgacaccacggtcaccgacgac
caggtgttgcccaactcctatcggctcccctcccaagtgcttgagatcgtccaacaggag
atcagtcacatcgacacccgccaggagaaagacctgaaaccccgcaaggagggcggcagc
gtcgaagcgatcgacagcccgtcgatgctggatctcgtgcggaacgtgcggcggaccgtc
gaggccaccgacgacgacacggtgatgatcctgttccgggcgcgctaccagctgttcgac
ttcgtggacgagttcatcggtgacggcatcccgttccgcgcgctcaccgaccagcggatg
tggaccgaccgcctccaacagtacatcaacgccgtcgaagccctggagaccgacgacgac
gtcaacggcctggaggctcgccggctcatggatatgctccaggattcggcgttcggcacc
aacgaccgcagcgatctccgggaggccatcgacgaggcccaaggcgagagcactgatctc
acggagctgacgttccccgcggagttcatccgggactacgtgccgttcgttcccgggccg
tcggcggccgccgacatgctgcggaaggtcacgcgctaccagcgccgcagcatcgacgcc
tacttcgagggtgactaccgtggcatggatccggatcgggtgcgcgtcggcacgatccac
tccgcgaagggccgcgaggccgatcacgtcttcttggcgacggatctcacggagaaggtc
gtcgagcagatggcggcgaccgccgaccccgagacggtgcccgacgacgtggagttcacg
agcaaaaccagcccggtgccgatcctgactgacaacgagcgccgcgtcttctacgtgggg
atgagccgtgcccgcgagcgcttggtactgttgcaggacctcgtcggcggcgcgccgacg
ctccccatcgacgtgttgctgtacggcgagcggaccggacagacgcttgcggacgcgctg
gacgccgatacgccggtgcagatcccgtaa
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