Halobacterium sp. BOL4-2: JRZ79_11460
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Entry
JRZ79_11460 CDS
T07284
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRZ79_11460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_11460
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JRZ79_11460
Prokaryotic type
Archaeal type
TFB
JRZ79_11460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
RB_B
DUF8122
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QRY26018
LinkDB
All DBs
Position
pBOL4-2_105.9:complement(97537..98463)
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AA seq
308 aa
AA seq
DB search
MATRDIYETAFDEDVQTDTESNQCPECDGRVTTNAVETVCEDCGLVIEEQRLDHGPEWRG
FDEDERDRTGAPLTAARHDRGLSTEIGRGTDANGNELSGQKRRRLARMRREQTRGRFQSK
AERNLAHGLGEVRRLASALELSESIRDQACQLFRSAQNEDLLRGRSIEAIAAASVHGACR
CNGRSQLLDDILTVATVAESRVTNAYKTLNKELGLPAKPVRPTMYIPRLASDLDCPERIR
RRARVLAEAAEEAGVTTGVHPAGFAAACLYTAGQEQGRWVTQYAVAESGNVTPTTVQAHY
ETLKEQVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctacgagacagcgttcgacgaagacgtccagaccgacacggag
tcgaatcagtgtcccgagtgcgacggccgggtcaccaccaacgcagtcgaaaccgtctgc
gaggactgtggcctcgttattgaggagcaacgtctcgaccacgggccagagtggcgaggg
ttcgacgaagacgagcgcgaccggacgggtgccccactcactgcggcccgccacgatcgc
ggcctgtcgacggaaatcggtcgcggcaccgacgcgaacgggaacgaactttccgggcag
aagcgacggcgactcgcgcggatgcgccgtgagcagacccgtgggcggtttcagtcgaaa
gcggaacggaacctcgcacacgggctgggcgaagtgcgccggttggcgagtgccctcgag
ctctccgagtcgattcgcgatcaggcgtgccagctcttcaggagcgcgcaaaacgaggat
ctgcttcgtggcagatctatcgaggcgatcgccgcggccagcgtccacggggcctgccgg
tgcaacggccggtcgcagctcctcgacgacattctgacggtggcgacggtcgcagaatcg
cgggtcacgaacgcgtacaagacactcaacaaggagctgggactcccagccaaacccgtg
aggccgacgatgtacattccacggctggcatccgacctcgactgcccggagcggatccga
cgtcgggcgcgagtacttgccgaagcagccgaggaggcgggggtgacgaccggcgtccac
ccggccggcttcgccgcggcctgtctctacacggccggccaagaacaggggcggtgggtg
acgcagtatgctgtcgccgagtccgggaacgtcacgccgacgactgtccaggcgcattac
gagacactaaaagagcaggtagcctga
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