Halobacterium sp. BOL4-2: JRZ79_11565
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Entry
JRZ79_11565 CDS
T07284
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
JRZ79_11565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
habo03019
]
JRZ79_11565
03009 Ribosome biogenesis [BR:
habo03009
]
JRZ79_11565
04131 Membrane trafficking [BR:
habo04131
]
JRZ79_11565
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
habo04147
]
JRZ79_11565
Messenger RNA biogenesis [BR:
habo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
JRZ79_11565
Ribosome biogenesis [BR:
habo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
JRZ79_11565
Membrane trafficking [BR:
habo04131
]
SNARE
SNARE associated proteins
Others
JRZ79_11565
Autophagy
Aggrephagy
Other aggrephagy associated proteins
JRZ79_11565
Exosome [BR:
habo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JRZ79_11565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
RNA_helicase
Parvo_NS1
Sigma54_activat
nSTAND3
TIP49
AAA_33
Mg_chelatase
AAA_7
AAA_28
NPHP3_N
IstB_IS21
AAA_24
AAA_18
PhoH
ATPase_2
AAA_30
AAA_lid_3
Torsin
Motif
Other DBs
NCBI-ProteinID:
QRY26212
LinkDB
All DBs
Position
pBOL4-2_299.7:join(299368..299663,1..928)
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AA seq
407 aa
AA seq
DB search
MLAVEDQHLLVNENGSIIQVQSNIQRQVTPGDYVNVENTLGQDKAVGVAREDDPSGQHAR
VEKVTDDYILVQTNSRSRILANPAEDVSPGDGVLLTELGEFYKVFEDGIVELDDTTLDPL
REVNETDSSDLTPKNVPDKEYADFGGMDDVVEEVKYKVEVPLKEPERFEDVGMSAPKGVL
FYGPPGTGKTYLAKIVANQVEDASFYSIRGPELSHELVGGTARKLRGLFENAKKNPPAII
FFDEIDSMAPRRDKTRDAGRRTVGQLLSLMDGIEERGRVVVIGTTNLIGAIDPALRRPGR
FGREIEFPRPSREGRREILNIHKPDVEFADTVSLENLVEKSSGWTGAHIESLFEEIGEIL
LKGERDREGSPTIRRMDVERAYERVQAQINNKEAQRRREQEAEEGAD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgctgtagaggatcagcatctactggtcaatgaaaacggttctatcattcaagta
cagagtaatattcagcgccaggtgacccccggagactacgtcaacgttgaaaatactctt
ggacaggacaaagcggtcggcgtggcgagagaagatgatccgtcgggccaacatgcacga
gtagagaaagtcaccgatgactacatcttagtccagacgaacagcagatcacggatactc
gcaaatccggctgaggatgtctcaccgggggatggcgtgttgcttacggaactaggtgaa
ttctacaaagtatttgaagacggtatcgttgaactcgacgataccaccctagaccccctg
cgagaggtaaacgagactgactcgtctgatctcacaccaaaaaacgttcctgacaaagag
tatgcggatttcggtgggatggacgatgtcgttgaggaagtgaaatacaaagtggaagtc
cctctcaaggagccagaacgattcgaggatgtcgggatgagtgctccgaaaggcgtgctg
ttctacggcccaccggggactggcaaaacgtatctggcgaaaatcgtcgcgaaccaagtc
gaagatgcgtcattttacagcatcagaggcccagagttgtctcatgagttagttggcggg
acggcacggaagctccgcgggttgttcgagaatgccaagaaaaatccgccagcaatcatc
ttctttgacgaaatagattcgatggcaccgcgacgggacaagacaagggatgccggtcgc
cgaaccgtcggccaattgttgtcgttaatggatggcatcgaggaacgcgggcgagtggta
gtcatcgggacgaccaatctgattggggcaatcgacccagcccttcggcgaccaggtcgg
ttcggacgggaaatagagttcccccgtccgtcgcgcgaaggccgacgagaaatcctcaat
atccacaaaccggacgttgaattcgctgacaccgtgagtcttgagaaccttgtcgagaag
tcgagtggttggactggtgctcatattgagtcgttattcgaagagattggagagattctg
ctgaagggagaacgggacagggaggggagtccgacaattcgtcggatggacgttgaacgt
gcctatgagagggtacaggcacaaatcaataacaaggaggcacaacgacgacgagagcaa
gaagccgaggagggcgcagactaa
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