Halobacterium sp. BOL4-2: JRZ79_12385
Help
Entry
JRZ79_12385 CDS
T07284
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JRZ79_12385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
habo02000
]
JRZ79_12385
Transporters [BR:
habo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JRZ79_12385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_14
AAA
Rad17
nSTAND_NTPase5
AAA_16
AAA_33
RsgA_GTPase
NB-ARC
AAA_19
PRK
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QRY26102
LinkDB
All DBs
Position
pBOL4-2_299.7:complement(177183..177923)
Genome browser
AA seq
246 aa
AA seq
DB search
MARVTLDSIRKQYGETTAVDGVSLTVGDGEIVGLLGPSGCGKTTTLRTVAGFETPNTGTV
SFDDRDVTHVPPENRNVGLVFQEYALFDNMTVIENVTFGLKMRAVQRADRRERAHALLDM
LGIDDLADRDPMTLSGGQQQRVGLARALAIEPRVLLLDEPMTGLDAKLKARLRAEVSQLL
SELDVTGLYVTHDQEEAMLMCDRIAVMNDGRLEQVGSPQEVYESPATEFVSEFVALDAPE
LPFVQW
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgtcacactcgattcgatccggaagcagtacggcgaaacgaccgccgtcgac
ggtgtctcgctcaccgttggggacggcgagatcgtcggcctgcttggcccttcgggctgt
gggaagacgacgacgctgcgaactgtggcaggcttcgagacaccaaacaccggcacagtc
tcgttcgacgaccgagacgtgacacacgttccaccggagaaccgaaacgtcgggctagtg
ttccaggagtacgccctctttgacaacatgacggtcatcgagaacgtaaccttcggactg
aaaatgcgtgccgttcagagagccgaccgcagggaacgtgctcacgcactcctcgacatg
ctcggcatcgatgatctggccgaccgtgacccaatgacactctcgggtggccaacaacag
cgcgttggcctcgcccgcgcactcgccatcgagccacgcgtcttgctcctcgacgagccg
atgacggggctggacgcgaaactgaaggctcgactccgtgcggaagtcagtcagcttctc
tcggagctggatgtcaccggtctctacgttacccacgaccaagaggaggcgatgctgatg
tgtgatcgcattgccgtgatgaacgacggacgcctcgagcaggttgggtccccacaggaa
gtgtatgagtcgcccgcaacggagttcgtctcggagttcgtcgccctcgatgcgcccgaa
ctcccattcgttcagtggtag
DBGET
integrated database retrieval system
