Halobacterium sp. BOL4-2: JRZ79_12870
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Entry
JRZ79_12870 CDS
T07284
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRZ79_12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
habo03021
]
JRZ79_12870
Transcription machinery [BR:
habo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JRZ79_12870
Prokaryotic type
Archaeal type
TFB
JRZ79_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
PHF5
Motif
Other DBs
NCBI-ProteinID:
UDF60574
LinkDB
All DBs
Position
pBOL4-2_299.7:complement(264435..265424)
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AA seq
329 aa
AA seq
DB search
MATRDIYETGFDEDVRTESSANRCPECDGRVTTNAVETVCEDCGLVIDEQRIDHGPEWRA
YDDEECERTGAPLTAARHDRGLSMEIGRGTDAKGNELSWQKRRRLARMRREQTRGRWRSK
AERNLAHELGEVRRLASALELSNSVRDQACQLFRSTQNEDLLRGRSIEAITAASVYGACR
CNGRSRLVDNVSEMARVAESRVTNAYKTLNEWLGLPAEPVSPGMFVPRLASDLECPDEIR
QRARKLAEQAEERGVTTGVHPAGFAAACLYKAGREEGRWLTQSEVSGAANISTTTVRNHR
DTLHQLDGEQRVGIKSTTQTRAASRKSKG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagacatctacgaaactggcttcgacgaagacgtccgaacggaatcgagt
gcgaaccggtgtcccgagtgcgacggccgggtcaccacgaacgcggtcgaaacggtctgc
gaggactgtggcctggtcatcgacgaacagcgaatcgaccacgggccagagtggcgggcg
tacgacgacgaggagtgcgaacgaacgggtgccccactcacggcggctcgccacgatcgc
ggactgtcgatggaaatcggtcgcggcaccgacgcgaaggggaacgaactctcttggcag
aagcgacggcgactcgcgcggatgcgccgtgagcagacccggggtcggtggcggtcgaaa
gcagaacggaatctcgcccacgagctgggcgaggtgcgtcggttggcgagtgccctcgaa
ctctccaattcggttcgcgaccaggcgtgtcagctcttccggagcacccagaacgaggat
ctgcttcgtggcagatccatcgaggccatcaccgcggccagcgtctacggggcctgccgg
tgtaacggtcgctcgcggttagtggacaacgtcagcgagatggcccgcgtcgcggagtca
cgggtcacgaacgcgtacaaaacgttgaacgaatggctgggccttcccgctgaacccgtc
tcccccggcatgttcgtaccgcgcctcgcctcagacctcgagtgtccggacgagatccgg
cagcgggcccgaaagctcgcagagcaggccgaggagcgcggcgttacaacgggcgtccat
ccggccgggttcgcagcggcctgcctctacaaggccggtcgcgaggaggggcgatggctg
acgcaatccgaggtttcgggagcggctaacatctcaacgacaacggttcggaaccatcga
gacacactacaccagttggacggtgaacaacgagtcggcatcaagagcactacacagaca
cgagcggcatctcgaaaaagcaagggttag
DBGET
integrated database retrieval system
