Haliovirga abyssi: HLVA_03060
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Entry
HLVA_03060 CDS
T09313
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
haby
Haliovirga abyssi
Pathway
haby02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HLVA_03060 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haby03021
]
HLVA_03060 (sigA_2)
Transcription machinery [BR:
haby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HLVA_03060 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_1
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BDU49737
UniProt:
A0AAU9DIU8
LinkDB
All DBs
Position
343362..344390
Genome browser
AA seq
342 aa
AA seq
DB search
MNNEYLLREIKKRTKNNSIKQSDIEDILSMEKIDENSYEEIIDYLVSKNIKVLDEEIIIE
SEEDMESVSLMKDVDIMKQYMKEVSEYELLSPKVQMEYLNIKDNDEKVKNLLVESNLRLV
VGLAVKYSKQGVSFLDLIQEGTLGLMKAIDKFDGTKGYRLSTYATWWIKKYMIDFLNEKV
ASMKVPTHIYLKYQMLKKAEKAISQENGRAATLEEIAERTYMTVDEASRIKSIIESKMIA
IDSYTGEDGNGKFDISDDSTEEEIEAELEKLASENKINKMLKKLDSREIKIIKMYFGFSE
DGRRYTFKEIGEELNLSAERIRVIKERSLKKLRYIGKKIWKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaatatttattaagagaaataaaaaaaagaacaaagaataactcaataaaa
caatctgacatagaagatatattaagtatggaaaaaatagatgaaaatagttatgaagaa
ataattgattatttagtatctaaaaatataaaagtattagatgaagagattataatagaa
agtgaagaagatatggaaagtgtatctttgatgaaagatgtagatattatgaaacaatat
atgaaagaagtttcagaatatgaattgttatctccaaaagtacaaatggaatatttaaat
ataaaagataatgatgaaaaagtgaaaaatttattggtagaaagcaatttgagattagtt
gttgggttagctgtaaaatattcgaaacaaggagtttcatttttagatttaattcaagaa
ggaacattaggtcttatgaaagcaatagataaatttgatggcacaaaagggtatagattg
agtacatatgcaacatggtggataaaaaaatatatgatagattttttaaatgagaaagtt
gcaagcatgaaagttcctacacacatatatttgaagtatcaaatgttgaaaaaagctgaa
aaagctatatcacaagagaatggcagagcagctacattagaagaaatagcagaaagaact
tatatgacagtagatgaagcatcgagaataaaaagtataatagaaagcaaaatgatagca
attgactcatatactggtgaagatggaaatgggaaatttgatatttcagatgatagcacc
gaagaagagattgaagcagagttagaaaaattagcttctgaaaataaaataaataaaatg
ttgaaaaaattggattcaagagaaattaaaattataaaaatgtattttggattttctgaa
gatggaagaagatacacttttaaagaaattggagaagagttaaatttatcagcagaaaga
attagagttataaaagaaagatcattaaaaaaattaagatatattgggaaaaaaatatgg
aaagattaa
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