Haliovirga abyssi: HLVA_04340
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Entry
HLVA_04340 CDS
T09313
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
haby
Haliovirga abyssi
Pathway
haby00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HLVA_04340 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
haby01007
]
HLVA_04340 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haby03016
]
HLVA_04340 (trpS)
Enzymes [BR:
haby01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
HLVA_04340 (trpS)
Amino acid related enzymes [BR:
haby01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HLVA_04340 (trpS)
Transfer RNA biogenesis [BR:
haby03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HLVA_04340 (trpS)
Prokaryotic type
HLVA_04340 (trpS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
PfUIS3
Motif
Other DBs
NCBI-ProteinID:
BDU49865
UniProt:
A0AAU9DX22
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All DBs
Position
complement(512095..513069)
Genome browser
AA seq
324 aa
AA seq
DB search
MRSLSGIQPSGTLHIGNYFGAIKQFIDFQSKYDGFYFIADYHALTSHPSPAQLTKNTYDV
VLDYLAFGLDPEKSTLFLQSDVPEVTELTWILSNVTPIALLERAHSYKDKVAKGIAANHG
LFTYPILMASDILIYNSDIVPVGKDQKQHVEMARDIAIKFNSIYGDIFKLPKELIKDTMA
VVPGIDGQKMSKSYNNTIEMFAPKKSLKKQIMKIVTDSTPLEEPKNPDICNVFALYKLFA
TETQLEEMRRKYLGGNYGYGHAKKELLEIILEYFKPYRERREELVNNMDYVKKVLKDGAE
KARSVATEKIIEVKKAVGLVGNIY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtttatcaggaattcaaccaagtgggactttacatataggcaattactttggt
gcaatcaaacaatttattgattttcaatctaaatatgatggattttattttattgctgat
taccatgcgcttacatctcatccaagtccagcacaattaactaaaaacacatatgatgta
gtcttagattatttagcttttggacttgatccagaaaaatctacactatttttacaatca
gatgtaccagaggttacagaattaacttggattttaagtaatgtaactccaatagcactt
ttagaaagagctcattcttataaagataaagtagcaaaaggaattgctgcaaatcacggg
ctatttacttaccctatattaatggcttctgatattttaatttataattctgatatagta
cctgttgggaaagatcaaaagcaacatgtggagatggcaagagatattgcaattaaattt
aatagtatttatggggatattttcaagcttccaaaagaattaataaaagatacaatggct
gtcgttcctggaatagatgggcaaaaaatgtcaaaaagttataacaatacaatagagatg
tttgctcctaaaaaatctttgaaaaagcaaattatgaaaatagtaactgacagcactcca
ttagaagaacctaaaaatcctgacatctgtaatgtttttgctttatataaattgtttgca
acagaaactcaacttgaagagatgagacgaaaatatttaggtggaaattatggatatggt
catgctaaaaaagaacttttagaaataattttagaatattttaaaccatatagagaaaga
agagaagaattagttaataatatggattatgtaaaaaaagttttaaaagatggtgctgaa
aaagctcgtagtgttgcaacagaaaaaattatagaagtaaaaaaagctgtcggattagtt
ggaaatatttactaa
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