Haliovirga abyssi: HLVA_09540
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Entry
HLVA_09540 CDS
T09313
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
haby
Haliovirga abyssi
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HLVA_09540 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haby03019
]
HLVA_09540 (rnc)
03009 Ribosome biogenesis [BR:
haby03009
]
HLVA_09540 (rnc)
03036 Chromosome and associated proteins [BR:
haby03036
]
HLVA_09540 (rnc)
Enzymes [BR:
haby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HLVA_09540 (rnc)
Messenger RNA biogenesis [BR:
haby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HLVA_09540 (rnc)
Ribosome biogenesis [BR:
haby03009
]
Eukaryotic type
90S particles
RNase
HLVA_09540 (rnc)
Prokaryotic type
rRNA processing factors
HLVA_09540 (rnc)
Chromosome and associated proteins [BR:
haby03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HLVA_09540 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BDU50385
UniProt:
A0AAU9E1W9
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All DBs
Position
1099245..1099961
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AA seq
238 aa
AA seq
DB search
MLSDKKICEFEKKINYTFLDKSLLTKALIHRSYGNEHRDFKNINNEKLELLGDAVLDLII
TEYIYIKFSNATEGELAKLKAMIVSEPLLAEVSTEIGIGSYMFLSKGEELTGGRERNSIL
GDVFEALLGGIYLDSGFENAKEFVLKYFVDRIVHIDENLDLVDYKTILQEFTQKEYKKIP
KYIVLEELGPDHNKQFKVGVKVKNSIVGEGLGRNKKSAEQMAARNACGRLEVKLHETL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgttatcagataaaaaaatatgtgaattcgaaaaaaaaattaattatacttttttagat
aaatctttattaacaaaagctttaatccatagatcatatggaaatgaacatagagatttt
aaaaatataaataatgaaaaattggaattacttggtgatgctgttttagatttaattata
acggaatatatatatataaagtttagtaatgcaactgaaggagaactcgctaaattaaaa
gctatgattgttagtgagcctctccttgcagaggtttctactgaaataggaattggaagt
tatatgtttttaagtaaaggagaagagctaactggtgggcgagaaagaaattctatttta
ggagatgtttttgaagccttattaggagggatttacttagattctgggtttgaaaatgcc
aaagaatttgttttaaaatattttgtagatagaattgttcatattgatgaaaatcttgat
ttagtagattataaaacaatattacaagaatttactcaaaaagaatataaaaagatacca
aaatatattgtattagaagagttaggaccagatcataataaacaatttaaagttggtgtt
aaagttaaaaatagtattgtaggagaaggtttaggcagaaataaaaaatcagcagaacaa
atggctgcaagaaatgcttgtggtagattagaggtaaaattgcatgaaacattataa
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