Haliovirga abyssi: HLVA_09590
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Entry
HLVA_09590 CDS
T09313
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
haby
Haliovirga abyssi
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haby03400
]
HLVA_09590 (radA)
DNA repair and recombination proteins [BR:
haby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HLVA_09590 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
ChlI
AAA_25
Zn_ribbon_LapB
Lon_C
DnaB_C
DUF7125
ABC_tran
nSTAND3
GvpD_P-loop
AAA_14
AAA_16
AAA
nSTAND_NTPase5
zf-RING_10
VapE-like_dom
AAA_24
NTPase_1
DUF7129
AAA_22
RecA_N
ATPase_2
AAA_29
NB-ARC
DUF365
AAA_19
DAP3
SLFN-g3_helicase
RsgA_GTPase
FeoB_N
MMR_HSR1
AAA_5
Zeta_toxin
AAA_18
MeaB
His_biosynth
AAA_17
KdpD
NACHT
UBA_NBR1_C
ATP-synt_ab
CobU
Viral_helicase1
RUBY_RBDX
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BDU50390
UniProt:
A0AAU9DY95
LinkDB
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Position
1103429..1104772
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AA seq
447 aa
AA seq
DB search
MKKKEYYVCTNCGYKTNKWIGKCPECESWNSFEEETEAPIKIKTEKSIKAITINEVELLK
DYRYKTNFNEFDRVLGGGLVRGEVVLLTGNPGVGKSTLLLQILKDYTKYGDVLYISGEES
AEQIKHRAKRLKINSDKLFLVSETEIEAIKKYILENKPKVVGVDSIQTLYSNEYNAIPGT
VTQIRESTLKIVEMAKKHGISFFIVGHITKDGKVAGPKLLEHMVDAVMSFEGEENYLYRI
LRNSKNRFGSINEVGIFNLEDDGISEIRNPSEFFLGERDEKNIGSIVVPVLEGTKVFLLE
IQSLTSTTNFGMARRVAQGIDYNRMQILLAILEKKFSLNLTTQDIFINIPGGLSVKETTI
DLAIALSILSSIRDIPVNNDVAALGELGLRGEVRKVSFITKRLNELKKMGFKKIYLPEGN
RKEVEKSSINLKFYYLKNLYELLERMK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaagaatattatgtgtgtacaaattgtgggtataaaactaataaatggata
ggaaaatgtccagagtgtgaatcttggaatagttttgaagaagagacagaagcacctata
aagataaaaacagaaaaatcaataaaagctattacaataaatgaagtagaattgttaaaa
gattatagatataaaacaaattttaatgaatttgatagagttcttggtggtggattggta
agaggggaagtagttttattaacggggaaccctggtgtaggaaaatctactttattactt
caaattttaaaagattatactaaatatggagatgtcttatatatttctggagaggaatct
gctgaacaaataaagcatagagctaaaagattaaaaataaatagcgataaactattttta
gtatctgaaacagaaatcgaagctataaaaaaatatattttagagaataaaccaaaagta
gttggagttgattctatacaaacattatattcaaacgaatataatgcaataccaggaact
gttacacaaattagagaatctacattaaagatagtagaaatggcaaaaaaacatggaata
tcattttttattgtggggcatattacaaaagatggtaaagttgcaggtccgaaattattg
gaacatatggttgatgctgtaatgagttttgaaggagaagagaattatttatatagaatt
ttaagaaatagtaaaaatagatttggttctattaatgaagtgggaatatttaatcttgaa
gatgatgggattagtgaaataagaaatccttctgaattctttttaggtgaaagagatgaa
aaaaatataggaagtattgtagttccagtcttagaagggacaaaagtatttttattagag
atacaatctttaacatcaactacaaattttggaatggctagaagagttgctcaaggaatt
gattataatagaatgcaaatattattagcaatattagaaaaaaaattctctttaaattta
actacacaagatatatttattaatattcctggagggttgtcagtaaaagagacaactatt
gatttagctatagctctttcgatattatctagtattagggatatacctgtaaataatgat
gtagctgcattgggagaacttggacttagaggagaagtgagaaaagtatcttttataaca
aaaagattaaatgaactaaaaaaaatgggatttaaaaaaatttatttgccagaggggaat
agaaaagaagtagaaaaatctagtattaatttaaaattttattatttaaaaaatttatat
gaattattggaaaggatgaaataa
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