Haliovirga abyssi: HLVA_09760
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Entry
HLVA_09760 CDS
T09313
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
haby
Haliovirga abyssi
Pathway
haby00240
Pyrimidine metabolism
haby01100
Metabolic pathways
haby01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HLVA_09760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
haby02044
]
HLVA_09760
Enzymes [BR:
haby01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
HLVA_09760
Secretion system [BR:
haby02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
HLVA_09760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
zf-RING_15
APOBEC4_like
Bd3614-deam
Motif
Other DBs
NCBI-ProteinID:
BDU50407
UniProt:
A0AAU9DG54
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All DBs
Position
1122923..1123378
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AA seq
151 aa
AA seq
DB search
MEIAILSGKRSKDPNTRVGSCIVNEKNRIVGIGYNGLPNGLNDDEFPWGNTGDYLNTKYP
FVCHAELNAILNSTSISLENCKIYTALFPCNECSKVIIQSGIREVIYLSDKHHDDDIFIA
SRMLLDRAGVNYRKLETTIDKMELSYNEENV
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgcaattttatctgggaaaagaagtaaagacccaaatacaagagttggttca
tgtatagtaaacgaaaagaatagaattgttggaataggttataatggattaccaaatggc
ttaaatgatgatgaatttccttgggggaatactggtgattacttgaatacgaaatatcct
tttgtttgtcatgcagaacttaatgctattttaaatagtacctcaataagtttggagaat
tgtaaaatttatacagcactatttccatgtaacgaatgttcaaaggtaataattcagtct
ggaataagagaagtaatttatttgtctgataagcaccatgatgatgatattttcatagct
tcaagaatgcttttggatagagcaggggtaaattatcgaaaattagaaacaacaattgat
aaaatggaattgtcttataatgaagaaaatgtataa
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