Haliovirga abyssi: HLVA_12130
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Entry
HLVA_12130 CDS
T09313
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
haby
Haliovirga abyssi
Pathway
haby02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HLVA_12130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haby03021
]
HLVA_12130
Transcription machinery [BR:
haby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HLVA_12130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
DnaD_N
DUF1959
Motif
Other DBs
NCBI-ProteinID:
BDU50644
UniProt:
A0AAU9D3V6
LinkDB
All DBs
Position
complement(1388662..1389483)
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AA seq
273 aa
AA seq
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MKNAQNLIKLYLSDIKDFKLLTKEEEYKLIEESKKGNEEAKEELILSNLKLVIKIAKGYR
NKGLSFMDLISEGNIGLIYAIEKFDLSRGFRFSTYAVWWIKQTITKSIINKGRGIRIPSY
KHDILNKINMYIGKYLSVYDKYPSPEEISEELNLDKDKVHQILIEFQDMVSLSTSVGEDI
FLEDIIPEKESEMLEDDILDEVIKENISKEMEILNERERDIVISRFGMGGIKPLTLEELG
KKYDITRERVRQIEKKALKKLKSVLKKDLLGLK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcacaaaatttaataaaactttatttaagtgatataaaagattttaaactt
ttaactaaagaagaagaatataaattaatagaagagtctaagaaaggaaatgaagaagca
aaagaagagcttatattatcaaatttaaaacttgtgataaaaattgctaaagggtataga
aacaaaggacttagttttatggatttgattagcgaaggcaatatagggctaatttatgct
atagagaaatttgatctttcaagggggtttagatttagtacttatgctgtatggtggata
aaacaaactataacaaagtctataataaataaagggagagggataagaattccttcatat
aaacatgatattttaaataaaataaatatgtacatagggaaatatttgtcggtttatgac
aagtatccttcaccagaagaaatttcagaagagttaaatttagacaaagataaagttcat
caaattttgatagagtttcaagatatggtatctttaagtacatcagttggggaagatata
tttttagaagatattattccagaaaaagaaagcgaaatgttagaagatgacattttagat
gaagttataaaagaaaacatttcaaaggaaatggaaattcttaatgaaagagaacgggat
atagttatttctagatttggtatgggaggaataaagcctttaacattagaggaacttggt
aaaaaatatgatattacaagagaaagagttagacagatagaaaaaaaagcattaaaaaaa
ttgaaatctgttttaaaaaaagatttgttagggctgaaatag
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