Haliovirga abyssi: HLVA_12770
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Entry
HLVA_12770 CDS
T09313
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
haby
Haliovirga abyssi
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haby03400
]
HLVA_12770
DNA repair and recombination proteins [BR:
haby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HLVA_12770
Archaeal homologous recombinant proteins
HLVA_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
SMC_N
AAA_27
AAA_29
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDU50708
LinkDB
All DBs
Position
complement(1461595..1464390)
Genome browser
AA seq
931 aa
AA seq
DB search
MRIKKVKLKNYRVHKDVEIEFTNGINLLLGKNGKGKSSILEAIGMVLFNVSQKERPNKDS
ILYGEKSAEIYVEFVGVDGNEYGVKKKIGTSPVNELRALNKNVILAKGTNDINIELKKII
GIENNVSAIFENVIMAYQNKMVNIFTEKGENRKKLFNKIFNTQIYREIYDRYSKSLANKY
NDSLNLLIGEINGLKSNLQDLNLLKESLEERKIKKVDIEKELDKLILELNDFEIKKENFE
KIKRKLEKERELENGILINLETTKNYILEREDELLNSKDALKKVVETEKDYLKYVEVEKK
ISELEKLHKDKLEFDLKLKKIKEGKLKSENQISINKSEINKYIELAKKDKNQILKSKEEV
EKLEEELNEIKKNGKEYRKSEEKLEEEINNYKKIFNSINDLNNEKKIKIKDKSNTEKNIK
LEEEFLQKKDILEKEIDDYNKKIEEKNSLNREIEILNYRVKELKNAEKSLIKGECPYFEE
KCKNLNSINTNRYFEDTKEKYVEKIDNINEKLENYKEVEKELKKIQTEKNRLEGQLSNIK
SDKLKLDKLKLEIENIDKNIEIKKLKNREYEFTNEEKEKLDLSLSKIKSKLENLIDEYNK
IEKSKKNKLEEQRKYEKNIEESENLIKSIEGKNEIIETKIEKLDKEIEELKNIPNELEKL
TIEIDELKGKKLILKKNYGIYQENINKSKELDRIEESIKKEEQKKKDLLKKQSKTVEAIT
ELEGKFIKEEYENILLEIKNLKLKKENIVEEKIEVKQEIEHIEKNIIIEKEKSKQIKEKE
KEEKRINLKNSLLKEFRDGLNELGPKIAKKFMEKIEILSTDNYRKITGRSEEVKFYDNYS
LVLKGANIEKSFNMLSGGEQIAVAISVRSAMAKFLSNTNFAIFDEPTINLDEERRLALAD
SFKEIVGNLEQAIIVTHDDTFREMAQNIIEL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
ttgagaataaaaaaagttaaattaaaaaattatagagtacataaagatgttgagatagag
tttactaatggaataaatctattattaggaaaaaatgggaaaggaaaatcatcaattttg
gaagcaatagggatggttttatttaatgtatctcaaaaagaaagacctaataaagattct
atattgtatggagagaaatcagctgaaatatatgtggaatttgtaggagtagatgggaat
gaatatggagtaaagaaaaaaattgggacatctcctgtaaatgaattaagggcacttaat
aaaaatgtaatattagcaaaaggaacaaatgatataaatattgaattgaaaaaaattatt
ggaatagaaaataatgtaagtgctatttttgagaatgtaattatggcttatcaaaataaa
atggtgaatatttttactgaaaaaggagaaaatagaaaaaaattatttaataaaatattt
aatactcaaatttatagagaaatatatgatagatattcaaaatcattagctaataaatat
aatgatagtttgaatttattaataggagaaataaatggattaaaatctaatttgcaggat
ttaaatttattaaaagagagtttggaagaaagaaagattaaaaaagtagatattgagaaa
gaattagataaactaattttagaattaaatgattttgaaattaaaaaagaaaattttgag
aaaataaaaagaaaattagaaaaagagagagaattagaaaatggcatattaataaattta
gaaacaactaaaaattatattttagaaagagaagatgaacttttaaattcaaaagatgct
ttaaaaaaagttgttgaaactgaaaaagattatttgaaatatgtagaagtagagaaaaaa
atatctgaattagaaaagctacataaagataaattagaatttgatttaaaattgaaaaaa
attaaagagggaaaattaaaatcagaaaatcaaatatctattaataaaagtgaaattaac
aaatatatagaattagctaaaaaagataaaaatcaaattttaaaaagcaaagaagaggtt
gaaaagttagaagaggaattaaatgagattaaaaagaatggaaaagagtatagaaaatca
gaagaaaaattagaagaagaaattaataattataaaaaaatatttaattctataaatgat
cttaataatgaaaaaaaaataaaaataaaagacaagagtaatacggaaaaaaatataaaa
ttagaagaagaatttttacaaaaaaaagatattttagaaaaagagatagatgattataat
aaaaaaatagaagaaaaaaatagtttgaatagagaaattgaaattttaaattatagagtt
aaagaacttaaaaatgcagagaaaagtttaataaaaggagaatgtccatattttgaggaa
aaatgtaaaaatttaaattctataaatacaaatagatattttgaagatacaaaagaaaaa
tatgtagaaaaaatagataatattaatgaaaaattggaaaattataaagaagtagaaaag
gaattaaagaaaatacaaacagaaaaaaatagactagaaggacaattgtctaatataaaa
agtgataaattaaaattagataagttaaaattagaaattgaaaatatagataaaaatatt
gaaataaaaaaattaaaaaacagagaatatgaatttacaaatgaagaaaaagaaaaactg
gatttgagtttatctaaaataaaaagtaaattagaaaatttaatagatgaatataataaa
atagaaaagagtaaaaaaaataaattagaagaacaaagaaaatatgaaaaaaatatagaa
gaaagtgagaatttaataaaaagcatagaaggaaaaaatgaaattattgaaactaaaata
gaaaaattagataaagagatagaagaattaaaaaatattcctaatgaattagaaaaatta
actatagagatagatgagttgaaaggaaaaaagttgatattaaaaaagaattatggaata
tatcaagaaaatataaataaatcaaaagaattagatagaatagaagagagtataaaaaaa
gaggaacaaaagaaaaaagatttattaaagaaacaatctaaaacggttgaagcgataaca
gagttagaagggaaatttataaaagaagaatatgaaaatattttgttagaaataaaaaac
ttaaaattaaaaaaagaaaatattgtagaagagaaaattgaggtaaaacaagagatagag
catatagaaaaaaatataataatagaaaaggaaaagagtaagcaaataaaagaaaaagaa
aaagaggaaaagagaataaatttaaaaaacagtttattaaaagaatttagagatggatta
aatgagttagggcctaaaatagctaaaaagtttatggaaaaaatagaaattttatcaaca
gataattacagaaaaataactggaagatctgaagaggtgaaattttatgataattatagt
ttagtattaaaaggtgcaaatatagaaaaaagttttaatatgttatctggtggcgaacag
atagcagtggcaatatcagttagaagtgcaatggccaagtttttatcaaatacaaatttt
gcaatatttgatgagccgactattaatttagatgaagaaagaagattggctttagcagat
tcatttaaagaaatagttggaaatttagaacaagctataattgtgacgcatgatgataca
tttagagaaatggcacaaaatataatagaactatag
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