Haliovirga abyssi: HLVA_12830
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Entry
HLVA_12830 CDS
T09313
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
haby
Haliovirga abyssi
Pathway
haby00260
Glycine, serine and threonine metabolism
haby00630
Glyoxylate and dicarboxylate metabolism
haby00670
One carbon pool by folate
haby00680
Methane metabolism
haby01100
Metabolic pathways
haby01110
Biosynthesis of secondary metabolites
haby01120
Microbial metabolism in diverse environments
haby01200
Carbon metabolism
haby01230
Biosynthesis of amino acids
haby01240
Biosynthesis of cofactors
haby04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HLVA_12830 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HLVA_12830 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HLVA_12830 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HLVA_12830 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HLVA_12830 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HLVA_12830 (glyA)
Enzymes [BR:
haby01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HLVA_12830 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BDU50714
UniProt:
A0AAU9DIX2
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Position
complement(1470332..1471576)
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AA seq
414 aa
AA seq
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MNLEYLRKEDPEIADVIEREEERQEYGIELIASENFVSKAVMEAAGSVLTNKYAEGYPDK
RYYGGCQIVDIAEKLAISRAKELFDVEYVNVQPHSGSQANMAVYIALINPGDTVMGMSLP
HGGHLTHGSKVSFSGKIYNSVSYGVAAGTETIDYEEVRKIAIENKPKLIIAGASAYPRII
DFKKFREIADEVGAYFVVDMAHIAGLVATGLHPSPVPYAHVVTTTTHKTLRGPRGGMIMT
NDEEIAKKINKAIFPGIQGGPLMHIIAAKAVAFKEALSDSFKEYQTQVVKNAKVLADELT
KAGLRIVSGGTDNHLMLVDLTPKGLTGKAVENALVKAEITVNKNGIPFDKEKPFVTSGIR
IGTPSVTTRGMKETEMVKIAELIVKVIDNIDNEDIIKEVKNEVRKLAERFPLYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggagtatttgagaaaagaagatccagaaatagcagatgtaattgaaagagaa
gaggagagacaggagtatggtattgagttaattgcttctgaaaattttgtgtcaaaagct
gttatggaggctgcaggaagcgtattgacaaataaatatgcagaaggatatcctgacaaa
agatattatggaggatgtcaaatagttgatattgcagaaaaattagcaatttcaagagca
aaagaactatttgatgtagaatatgtaaatgtacaaccgcattcaggttcacaagcaaat
atggctgtatatatagctttgattaatccaggagatacagtaatggggatgagccttcca
catggaggacatttaactcacggatcaaaagtaagtttttctggtaaaatctataattct
gtttcttatggagtagcagctgggacagaaacaatagattatgaagaggtaagaaagata
gctattgagaataaacctaaattaataatagcaggagcaagtgcatatccaagaataatt
gattttaaaaaatttagagaaatagcagatgaagttggagcatattttgtagtagatatg
gcacacattgcaggtctagtggctacaggtcttcatccaagtccagtaccatatgcacat
gttgtaactacaactactcataagactttaagaggtccaagaggtggtatgattatgact
aatgatgaagaaattgcaaagaaaataaataaagcaatatttccaggaatacaaggtgga
cctttaatgcacataatagctgcaaaagctgttgcatttaaagaagctttatcagattct
tttaaagaatatcaaactcaagtagtgaaaaatgctaaagttttagctgatgaattaaca
aaagcagggcttagaattgtttcaggtggaacagacaatcatttgatgcttgtagatttg
acaccaaaaggacttactggaaaagcagtagaaaacgcattagttaaagcagaaatcaca
gtaaataaaaatggaataccatttgataaagaaaaaccatttgttacaagtggaataaga
atagggactccatcagtgactacaagagggatgaaagagacagaaatggtaaaaatagct
gaattaatagttaaagtaatagataatatagataatgaagatataataaaagaagttaaa
aatgaagttcgtaaattagctgaaagatttccgttgtatagataa
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