Haliovirga abyssi: HLVA_15610
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Entry
HLVA_15610 CDS
T09313
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
haby
Haliovirga abyssi
Pathway
haby02024
Quorum sensing
haby03060
Protein export
haby03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HLVA_15610 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HLVA_15610 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLVA_15610 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
haby02044
]
HLVA_15610 (ffh)
Enzymes [BR:
haby01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HLVA_15610 (ffh)
Secretion system [BR:
haby02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HLVA_15610 (ffh)
Eukaryotic Sec-SRP protein
HLVA_15610 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
APS_kinase
Zeta_toxin
AAA_33
TsaE
KAP_NTPase
AAA_22
ATP_bind_1
RMNT_CmcI
AAA_30
KTI12
ABC_tran
ParA
AAA_16
nSTAND3
NACHT
Thymidylate_kin
6PF2K
AAA_18
AAA_17
NPHP3_N
DO-GTPase1
DnaB_C
AAA_14
AAA_19
PRK
MobB
AAA_24
AAA_31
MMR_HSR1
AAA_25
EcoEI_R_C
Cluap1
PPV_E1_C
AAA_5
cobW
Motif
Other DBs
NCBI-ProteinID:
BDU50992
UniProt:
A0AAU9DHH7
LinkDB
All DBs
Position
complement(1795837..1797171)
Genome browser
AA seq
444 aa
AA seq
DB search
MLNNLGNRFQDIFKKIKGNGKLSEKNIKDALKEVRLSLLEADVNYKVVKEFINKIKEKSV
GEDVLKGINPGQQFVKIVNDELIELLGGTNARLTKALRPPTVIMLAGLQGAGKTTFAAKL
AKFLKKKNEKPYLIGADVYRPAAMKQLQVLGESIDTPVFTIEGSKDAVEICTKGLAKAKE
ENATYAIFDTAGRLHIDENLMEELKNIRKIIKPQEILLVVDAMTGQDAVNVAKKFNETLN
IDGVVLTKLDGDARGGAALSIKAVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV
SLVEKAQETINEDEARELEEKIKKQTFDLEDFLKQLNQIKKLGPITKLLQMIPGANQLGD
LAPAEKEMKKIEAVIQSMTKEERKNPKLMNAGRKKRVAKGSGTNVQVVNNLLKQFEQMKK
MMKMFGGGGLPGMKGGFPGMKLPF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataatttaggaaatcgttttcaagatatatttaaaaaaattaaaggaaacggt
aaattaagcgaaaagaatataaaagatgctttaaaagaagttagactttcattattagaa
gctgatgtaaattataaagttgtaaaagagtttataaataaaataaaagaaaaatcagtt
ggagaagatgtattaaaaggtataaatccagggcaacaatttgtaaaaatagttaatgat
gaactaatagaattgttaggtgggacaaatgctagattaactaaagcattaagaccacca
acagtaattatgttagctggattacaaggtgcaggaaaaacaacttttgcagcaaaatta
gccaaatttttaaaaaagaaaaatgaaaaaccttatttaattggagcggatgtatataga
cctgcagctatgaaacagttgcaagttttaggagaaagtatagatacacctgtatttaca
atagaaggtagtaaagatgcagtggagatatgtactaaaggattagcaaaagcaaaagaa
gaaaatgcgacatatgctatatttgatacagcaggaagacttcatattgatgaaaatctt
atggaagaattaaaaaatataagaaaaattataaagccacaagaaattctacttgtagta
gatgcaatgacagggcaagatgctgttaatgtagcaaagaaatttaatgaaactttaaat
atagatggagtagtattaactaaattagatggagatgcaagaggaggagctgctttatca
ataaaagcagtagtaggaaaaccaataaaatttataggtgttggagaaaaacttgatgat
atagaactttttcatcctgatagattagtatctagaatacttgggatgggagatgtagtt
tcattagtagaaaaagcacaagaaactataaatgaagatgaagcaagagaattagaagaa
aaaataaaaaaacaaacttttgatttagaagattttttaaaacaattaaatcaaataaaa
aaattaggaccaataacaaaacttcttcagatgataccgggagctaatcaattaggagac
ttggcaccagctgaaaaagagatgaaaaaaatagaagcagttattcaatcaatgacaaaa
gaagagagaaaaaatcctaaattgatgaatgcaggtagaaaaaaaagggtagcaaaaggt
agcggaacaaatgtgcaagttgtaaataatttattaaaacaatttgaacaaatgaaaaaa
atgatgaaaatgtttggtggcggaggtttaccaggtatgaaaggtggatttccaggtatg
aagttgcccttttaa
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