Haliovirga abyssi: HLVA_20950
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Entry
HLVA_20950 CDS
T09313
Name
(GenBank) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
haby
Haliovirga abyssi
Pathway
haby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HLVA_20950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haby03400
]
HLVA_20950
Enzymes [BR:
haby01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HLVA_20950
DNA repair and recombination proteins [BR:
haby03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HLVA_20950
Prokaryotic type
HLVA_20950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF5580_M
TFB6
Motif
Other DBs
NCBI-ProteinID:
BDU51526
UniProt:
A0AAU9DYD0
LinkDB
All DBs
Position
pHIC:complement(58573..59319)
Genome browser
AA seq
248 aa
AA seq
DB search
MNKNDFLSFFYIDKSYSEFFSDEKIQYVLEVLKKLESNSEKFAPKKENIFKALEKDIKFC
KVLILGKDPYFQENAATGLAFEVNGLESWSSPFPQRSLQNIVKNIYKSYENQLINFSEIR
LKIKSNDFQIMPPNKLFKSWHNQGVILLNSLLTVKVDNNKNYSGSHMKYWKSFVEELIQY
ISKKNPNLSYFLWGNDAGKYEKFITNGTIFKSNHPALAFGKSPKDFLFFNGFFETKNIIN
WINYNTKK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgattttttatcttttttttatattgataaaagctactctgagtttttt
tcagatgaaaaaatccaatatgttttagaagtgttaaaaaagttagaatccaatagtgaa
aagtttgctcctaaaaaagaaaatatttttaaagcattagagaaagatattaaattttgt
aaagtattgattttaggaaaagatccttattttcaagaaaatgctgctactggattagct
tttgaagtaaatggattggaaagttggagctctccatttccacaaaggtctctacaaaat
atagttaagaatatttacaaaagttatgaaaatcaattaatcaatttttctgaaattaga
ttaaaaattaaaagtaatgattttcagattatgcctcctaacaaactatttaaaagttgg
cataatcaaggagtaatattattaaatagtttattgaccgttaaagttgataataataaa
aactattccggttctcatatgaaatattggaaatcatttgtagaagaattaatccaatat
attagtaaaaaaaatccaaatttaagttattttttatggggaaatgatgcaggtaagtat
gaaaaatttataactaatgggactatttttaaaagtaatcatcctgcacttgcttttggt
aaatctccaaaagatttcttgttttttaatgggttttttgaaactaaaaatattattaat
tggataaattataacacaaaaaaatga
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