KEGG   Haliovirga abyssi: HLVA_21380
Entry
HLVA_21380        CDS       T09313                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
haby  Haliovirga abyssi
Brite
KEGG Orthology (KO) [BR:haby00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:haby02048]
    HLVA_21380 (hsdR)
Enzymes [BR:haby01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HLVA_21380 (hsdR)
Prokaryotic defense system [BR:haby02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HLVA_21380 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 Helicase_C DEAD DUF4145 AAA_19 HALZ FAZ1_C PhoH SRP54 FAF1 Ax_dynein_light
Other DBs
NCBI-ProteinID: BDU51569
UniProt: A0AAU9DKW1
LinkDB
Position
pHIC:118325..121561
AA seq 1078 aa
MKSNFEFLIADWPTLANLGEFAEKNLFIDSNTTLIKLRVLAENIAKLIIKEENLIDPESN
NQIDRLKLLKREDLLEREIEEIFHSLRIIGNKATHEGYSSFDDADTYLSMAVKLSAWFKE
VYGSDLTFDSETTIYKTPEKFELTSDYEKLKKENEKLSKEFNELKAVNRSIRNKEEKKII
SIKAVQKIKFDEKETRKIIDEQLKSVGWEADSGNLRFSKGTRPEKGRNIAIAEWPTSKMR
VDYALFIGLEFVGVIEAKKKSTDVISVLNESKIYSEKARIIDNEKFVKGAPFNKYNIPFM
FAANGREYNKTIEEKSGIWFLNGRKPTNHPKALKNWYSPRDIEELLSKNIDDGNKKLEEE
PFNYLKSKEGLGLRYYQVEAIQEVEKAIVEGKDKILLTMATGTGKTRTAIALIYRLLKSG
RFKRILFLVDRASLGNQAGDSFKEAKMEDLQTFAQIYDVKEIKDKELEDTTKVHIATIQG
LVRRIIYSNDNELKPSVGQYDCIIIDEAHRGYILDKEMEEEEVNFKNQNDYVSKYRTAIE
YFEAVKIGLTATPALHTVDIFGHSVYEYSYRQAVIDGNLVDHEPPVIIETELNTNGMVWQ
VGEEVSVYNRKEGKVEKERLDDELKIEIEGFNRRVITKNFNRTVIKELVKYLNPESEEKT
LIFAATDEHADMIVKILKEEFEELGWEIYDNSIQKITGYLGKGQEEAIKRFKNEKLPNIV
VTVDLLTTGINVPEICNLVFIRRVKSRILYEQMIGRATRLCDKIGKTHFKIFDTVGVYDS
LKDYTDMKPIVQNPNQNFEKMIGEIELIEKKEHLNKKREEIIAKIQRKKKLIEKQELEEY
FKLKSGNKTPEEYIEEIKKMPVEDATKKLMDDIELFRYLDTVKYLPQKQYISNHKDAIIE
VKRGYGKKNKKPDDYLESFKKFIIENSDKIEALKLLKTAPTKITRQQLRGLKLILTEKDF
SETYLNSAYKDLKNEEILADIISFIKNAIDNEPLINHEDRIKLAVNKIRQKKQWNALQKK
WLDIIEKQLLVENIMQKEDFDKSAFKNQGGFKKIDKIFNGELESIIDELNKYLFNISA
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgaaaagtaattttgaatttttgattgcagattggccaactttagccaatttaggagag
tttgcagaaaagaatttatttattgattcaaatacaacattgataaaattaagagtttta
gcagaaaatatagcaaaattaataattaaggaagaaaatttaattgatcctgaaagcaat
aatcaaattgatagattaaaattgttaaaaagagaagatttactagaaagagaaattgaa
gaaatttttcatagtttaagaataataggaaacaaagctactcacgaaggatattcttca
tttgatgatgcagatacttatttatcaatggctgttaaattgtctgcttggtttaaggaa
gtttatggaagtgatttaacttttgattctgaaacaacaatttataaaacacctgaaaaa
tttgaattaacttctgattatgaaaaactaaaaaaggaaaatgaaaaattatcaaaagaa
tttaatgaattaaaagcagtaaacagatcaattagaaataaagaagaaaagaagatcatc
tcaattaaagctgtacagaaaattaaatttgatgaaaaagaaacaagaaaaattattgat
gaacaattaaagagtgtagggtgggaagctgatagtggaaatttaagattttcaaaagga
acaagaccagaaaaaggaagaaacatagctattgcagagtggccaacatcgaagatgaga
gttgactatgcactatttattggcttggagtttgtaggagtaatagaagccaaaaagaaa
tcaactgatgtaatatcagttttaaatgaatcaaaaatctactctgaaaaagcaagaatt
atagataatgaaaaatttgtaaaaggagcaccttttaataaatataatattccttttatg
tttgcagctaatggaagagaatataataaaacaattgaagaaaaatcgggcatctggttt
ttaaatggaagaaaacctactaatcacccaaaagcattaaaaaattggtattctccacgt
gatattgaggaattattaagtaaaaatattgatgacggaaacaagaaacttgaagaggaa
ccttttaattatttgaaatcaaaagaaggtttaggattaagatattatcaagtagaagca
atacaagaggtagaaaaagcaattgtagaaggaaaagataaaatattgcttacaatggca
actggcacaggaaaaacaagaactgcaatagctttaatttatagattactaaaaagtgga
agatttaaaaggatattatttctagtagatagagcaagtttagggaatcaggcaggagat
agcttcaaagaagctaaaatggaagatttacaaacttttgcacaaatttatgatgtaaaa
gaaataaaagataaagagcttgaagatacaacaaaagtacatattgcaacaattcaagga
ttagtaagaagaattatatatagtaatgataatgaattaaaaccaagtgtgggtcaatat
gattgtataattattgatgaagcacatagaggttatattttagataaagagatggaagaa
gaggaagtgaattttaaaaatcaaaatgattatgtaagtaaatatagaacagctatagag
tattttgaggcagttaaaattggattgactgcaactcccgcattgcatactgtagacata
tttggacatagtgtttatgagtacagttatagacaagcagtaatagatggaaacttagtt
gaccacgaaccacctgtaattattgaaacagagttaaatacaaatggtatggtttggcaa
gttggagaggaagtatctgtttataatagaaaagaagggaaagttgaaaaagaaagacta
gatgatgaattaaaaatagaaatagaaggttttaatagaagagtaataacaaaaaatttt
aatagaactgttataaaagaattagtaaaatatttaaacccagaatcagaagaaaaaaca
ttaatatttgcagcaacagatgaacacgctgatatgatagtaaaaatattgaaagaagaa
tttgaagaattaggttgggaaatatatgataattctattcaaaaaataactgggtatctt
ggaaaaggacaagaagaagctatcaaaagatttaaaaatgaaaaattgcctaatattgtt
gtaactgtggatttacttactacaggaattaacgtacctgaaatatgtaacttggtattt
ataagaagagtaaaatcaaggattttgtatgaacaaatgatagggagagcaacaagatta
tgtgataaaatagggaaaactcattttaaaatatttgatacagttggagtatatgattcg
ttaaaagattatacagatatgaagccgatagtacaaaatcctaatcaaaattttgagaaa
atgataggtgaaatagagttaatagaaaaaaaagaacatttaaataaaaagagagaagaa
atcattgcaaaaatacaaagaaaaaagaaattaattgaaaaacaggagttagaagaatat
tttaaattgaaatcaggaaataaaacaccagaagaatatattgaagaaataaaaaagatg
ccagtagaagatgcaactaaaaaattaatggatgatattgaactatttagatatttagac
acagtaaaatatttacctcaaaaacaatatatttcgaatcataaagatgcaataattgaa
gtgaaaagaggatatgggaaaaaaaataaaaagccagatgattatttggaatcttttaaa
aagtttataattgaaaacagtgataaaattgaagctctgaaattattaaaaacagcacca
actaaaataactaggcaacaattaagagggcttaaattaatacttacagaaaaagatttt
tcagaaacatatttgaactctgcatataaggatttaaaaaatgaagaaatattagcagat
ataataagtttcataaaaaacgctattgataatgaaccgttaataaatcatgaggataga
attaaacttgcagtaaataaaatcagacaaaaaaaacagtggaacgctttacaaaagaaa
tggttagatataatagaaaaacagttgttagttgaaaatataatgcaaaaagaagatttt
gataaatcagcatttaaaaatcaaggtggatttaaaaagatagataaaatatttaatgga
gaattagaaagtataatagatgaattaaacaaatatttatttaatatttcagcatag

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