Helicobacter acinonychis: Hac_0124
Help
Entry
Hac_0124 CDS
T00371
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hac
Helicobacter acinonychis
Pathway
hac03030
DNA replication
hac03430
Mismatch repair
hac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hac_0124 (dnaE)
03430 Mismatch repair
Hac_0124 (dnaE)
03440 Homologous recombination
Hac_0124 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hac03032
]
Hac_0124 (dnaE)
03400 DNA repair and recombination proteins [BR:
hac03400
]
Hac_0124 (dnaE)
Enzymes [BR:
hac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hac_0124 (dnaE)
DNA replication proteins [BR:
hac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hac_0124 (dnaE)
DNA repair and recombination proteins [BR:
hac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hac_0124 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAJ98976
UniProt:
Q17ZF0
LinkDB
All DBs
Position
113552..117181
Genome browser
AA seq
1209 aa
AA seq
DB search
MKETKAFTHLHLHTEYSLLDGANKIKILAKRIKELGMKSVSMTDHGNMFGAIDFYTSMKK
EGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGYENLMYLSSMAYLEGFYYFPR
INKKLLREHSKGIIASSACLQGEVNYHLNTNSERNRRYGAKGYDEAKKIACEYQEIFEDD
FYLEIMRHGILDQRFIDEQVIKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTL
NDQGRLKHSVHEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKTYAQNEGLDFEDDASYFAHKAREGLKERLILVPKEKHEQYRERLEKEIEVITNMK
FPGYMLIVWDFIRYAKERGIPVGPGRGSAAGSLVAFALKITDIDPLKYDLLFERFLNPER
ISMPDIDTDFCQRRRKEIIEYMIEKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEA
DDFAKLIPNRLGITLKGYEKNGEFIEGAWELEPKIKELVESNDTARQVWEYSLNLENLNR
NAGVHAAALVVDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHQIDVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGLNKRLRPSSFE
DIIAIIALGRPGPMESGMVDDFVNRKHGIEPITYAFKELEPILKPTYGTIVYQEQVMQIV
QTIGGFSLGEADLIRRAMGKKDAQIMAGNKAKFVEGAKNLGHDGQKAINLWDLIVKFAGY
GFNKSHSAAYAMITFQTAYLKTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPP
HINSSMQDFSVAEFKNEKVEKKIVFGLGAIKGVGSEPIKNIIEERTKGDYKNLEDFISRM
DFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDVGRAKDKANEMMQGGNSLFGAM
ESETREQVILDMADLGEHDAKMLLEYEYETLGIHVSGNPLDEFKEEIKGFKNLVKSIDIE
ELEIGSQAYLLGKIMEVKKKIGKRSGKPYGTAEILDRYGKFELMFFEKQLNALEELDINK
PLVFKCKIEEQEEVARLRLFEILDLKSAREVKIPKAHYKDSNKQKEDVREIPPIEMLASS
SCSLAIVLENDVKKEFLRQIKESALKHQGKRPLYLIIKDKGKQFKFQSDLLVDEKIKDDF
KELEWRDLA
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagactaaagcttttacgcatttgcacttgcacacagaatattcgcttttagat
ggggccaataagattaaaatcttagccaaacgcattaaagaattgggcatgaaaagcgtg
agcatgaccgatcatgggaacatgtttggagcgattgatttttatacgagcatgaaaaaa
gaaggcatcaagcctatcataggcatggaagcgtatatccataatgacgacaacctctcc
agcaaagaaaccaaacaacgcttccatttgtgtttattcgctaaaaaccaagagggctat
gaaaatttgatgtatttaagctctatggcgtatttagaggggttttattattttccgcgc
atcaataaaaagcttttaagggagcattctaaagggattatcgcttctagtgcgtgcttg
caaggggaagtcaattaccatttgaataccaatagtgagagaaatcgcaggtatggggct
aagggctatgatgaagctaaaaaaatcgcttgcgaataccaagagatttttgaagacgat
ttttatttagagatcatgcgccatggcattttagatcagcgattcattgatgagcaagtc
attaaaatgtctttagaaacagggttaaaaatcattgccacaaacgacacccactacacc
atgcctaacgacgctaaagctcaagaagtagcgatgtgcgtagcgatgggtaaaacccta
aacgatcaagggcgtttgaaacactccgtgcatgagttttacattaaatcccctgaagaa
atggcgaagttgtttgcagatattccagaagctttagaaaacacccaagaaatcgctgat
aaatgcgttttagagattgatttaaaagacgataaaaagaaccccccaacccccccaagc
tttaaattcaccaaaacttacgcccaaaacgaagggctagattttgaagatgacgcttct
tatttcgcccacaaggctagagagggcttgaaagagcgtttgattttagtgcctaaagaa
aagcatgagcaatatagagagcgattggaaaaagaaattgaagtcattacgaacatgaaa
ttcccaggttatatgctaattgtgtgggattttatccgttacgctaaagaaaggggtatt
cctgtagggcctggtagggggagcgcggcagggagcttggtggcttttgcactaaaaatc
accgatattgaccccttgaaatacgatttgctttttgaaagatttttaaatcctgaaagg
atcagcatgcctgatattgatacggatttttgccaacgccggcgtaaagaaatcatagaa
tacatgattgaaaaatacggcaaatataatgtggctcaagtcatcacctttaataaaatg
ttggctaaaggcgtgattagagatgttgcaagggttttggacatgccttataaagaggct
gatgattttgccaaactcatacctaatcgcttgggtatcacgcttaagggctatgaaaaa
aatggcgagttcatagagggggcgtgggaattagagcctaaaatcaaagaattagtagaa
agcaatgatacggctagacaagtgtgggagtattcgctcaatttagagaacttgaatcgc
aacgcaggcgtgcatgccgcagctttggtggtggatagccaaaaagaattgtggcacaaa
acccctttatttgcttctgaaaaaaccggcggtatcgttacgcaatattccatgaaatat
ttagagccggtggatttgatcaagtttgactttttggggcttaaaaccttgaccgtgatt
gatgatgcacttaaaatcattaaaacgcaacaccaaattgatgtggattttttatcgctg
gatatggacgaccctaaagtgtataaaacgatccaaagcggcgatacggtggggatattc
caaattgaatccggaatgtttcaagggcttaacaagcgcttaagaccttcaagctttgaa
gacattatcgctattatcgcgctagggagaccaggacccatggaatcaggcatggtagat
gactttgtcaatagaaagcatggcattgagcctatcacatatgcgtttaaggaattagag
ccgattttaaagcccacttatggcacgatcgtctatcaagagcaagtgatgcaaatcgtg
caaactatcggcgggtttagtttgggcgaagcggatttgatccgccgtgctatggggaaa
aaagacgctcaaatcatggcgggcaataaggctaaatttgtagaaggggctaaaaattta
gggcatgatggtcaaaaagcgattaatttgtgggatttgatcgttaaatttgccggctat
ggtttcaacaaatcgcattcagccgcctatgcgatgatcactttccaaacagcgtattta
aagacttattataagcatgagttcatggcagcgatgctcactagcgaatccaataagatt
gaatccgtggcacgctatattgatgaggttagggctttagaaattgaagtgatgcctccg
cacatcaattcttctatgcaagatttcagcgtggcagagtttaaaaacgaaaaagtagaa
aagaaaatcgtgtttggtttaggcgcgattaaaggggtagggagcgagccgattaaaaac
atcattgaagaaaggactaaaggggattataagaatttagaagattttatttcacggatg
gatttttccaaactcactaaaaaatctttagagcctttagtgaaatctgggagcttggat
aatttgggctacacacgaaaaaccatgctcgctaacttggatttgatctgcgatgtgggg
cgtgctaaagacaaggctaatgaaatgatgcaagggggcaattctctttttggggcaatg
gaaagtgaaacaagagagcaggtcattttggatatggctgatttaggcgaacatgacgct
aagatgcttttagaatacgagtatgaaactttaggtatccatgtttcaggcaacccttta
gatgagtttaaagaagagattaagggctttaaaaatttggtcaaaagcattgatattgaa
gagttagaaatcggatcgcaagcttacttgcttggtaaaatcatggaagttaaaaagaaa
attggtaaacgaagcggtaagccttatggcacagcggaaattttagacagatacggcaag
tttgagctcatgttttttgaaaagcaattaaacgctttagaagagttggatataaacaag
cctttagtgtttaaatgcaagattgaagagcaagaagaggttgcacgattaaggcttttt
gaaatcttggatctaaagagcgctagagaggttaaaatccctaaagcccactataaagac
tctaacaaacaaaaagaagatgtgcgcgaaatcccccccattgaaatgctcgcttctagc
tcttgctctttagcgatcgtgttagaaaacgatgtgaaaaaagagtttttaagacaaatc
aaagagagtgctttaaaacaccagggcaaacgccccttgtatttgattatcaaagataag
ggcaagcaattcaaattccaaagcgatttgttggtagatgaaaagattaaggacgatttt
aaagaattagagtggagggatttagcttga
DBGET
integrated database retrieval system
